RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ISYNA1Q9NPH2 558 aa11.31□□□□□ -0.6
TSPAN3-205ENST00000558745 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 DNAJC9-AS1A6NH13 148 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 MGST3O14880 152 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 SC5DO75845 299 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 MMP23AO75900 390 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 CPEP16870 476 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 COX7A1P24310 79 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 FABP5Q01469 135 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 MLLT11Q13015 90 aaPredicted RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 ATXN7L3Q14CW9 347 aaPredicted RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 SLC9A3R2Q15599 337 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 SSX1Q16384 188 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 BAIAP2L2Q6UXY1 529 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 Q8NFD4 153 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 OR51T1Q8NGJ9 327 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 CPNE2Q96FN4 548 aaPredicted RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 COQ2Q96H96 371 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 S100A13Q99584 98 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 BANF2Q9H503 90 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 METTL8Q9H825 291 aaKnown RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 RHOFQ9HBH0 211 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 TCF7L1Q9HCS4 588 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 BLOC1S6Q9UL45 172 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 MRPS28Q9Y2Q9 187 aaKnown RBP11.3□□□□□ -0.6
TSPAN3-205ENST00000558745 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 HAX1O00165 279 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 NPFFO15130 113 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 SRMP19623 302 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 MAPK3P27361 379 aaPredicted RBP11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 P2RX3P56373 397 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 GABARAPL2P60520 117 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 TBCEQ15813 527 aaPredicted RBP11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 TAF9Q16594 264 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 HSD17B12Q53GQ0 312 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 Q6YL49 198 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 PLPPR1Q8TBJ4 325 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 GFI1Q99684 422 aa11.29□□□□□ -0.6
TSPAN3-205ENST00000558745 DSCAML1Q8TD84 2053 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 TRAV39A0A0B4J263 110 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 MEIOCA2RUB1 952 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 MELTFP08582 738 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 UCHL1P09936 223 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 ZNF728P0DKX0 622 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 BMXP51813 675 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 UBE2E1P51965 193 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 BPIFB3P59826 476 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 MEF2CQ06413 473 aaPredicted RBP11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 KRBOX4Q5JUW0 171 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 AWAT2Q6E213 333 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 OR10K2Q6IF99 312 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 TMEM104Q8NE00 496 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 KCNK15Q9H427 330 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 UNKLQ9H9P5 680 aaKnown RBP11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
TSPAN3-205ENST00000558745 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 OMGP23515 440 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 ERP29P30040 261 aaKnown RBP11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 SAA4P35542 130 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 GDNFP39905 211 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 UTF1Q5T230 341 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 ATAD3CQ5T2N8 411 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 TRAPPC6BQ86SZ2 158 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 ZNF714Q96N38 554 aa11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.61
TSPAN3-205ENST00000558745 SHISA3A0PJX4 238 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 ODAMA1E959 279 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 FAM172BPA6NC97 362 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 GTF2F2P13984 249 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 PRAMEF5Q5TYX0 476 aa11.26□□□□□ -0.61
TSPAN3-205ENST00000558745 NCR3LG1Q68D85 454 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms