RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CLEC12BQ2HXU8 276 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 EIF2S3LQ2VIR3 472 aaKnown RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 WDFY1Q8IWB7 410 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 BMPERQ8N8U9 685 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 RTBDNQ9BSG5 229 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 THADAQ6YHU6 1953 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 CTXN2P0C2S0 81 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 NPBWR2P48146 333 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 RAB13P51153 203 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 NKX6-1P78426 367 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 TMEM267Q0VDI3 215 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 TBC1D28Q2M2D7 210 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 NANPQ8TBE9 248 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 MYOZ1Q9NP98 299 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 A0A0G2JMM0 328 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 A0A1W2PPB8 328 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 LOC390937A0A1W2PQ73 354 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 A0A1W2PRS3 328 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 KIR3DP1A8MWS1 328 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 LDLRAD4O15165 306 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 NQO2P16083 231 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 SSPNQ14714 243 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 OR5B12Q96R08 314 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
AP4E1-202ENST00000558439 RNF126Q9BV68 326 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 GPR27Q9NS67 375 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 GNG12Q9UBI6 72 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 STARD10Q9Y365 291 aa13.44□□□□□ -0.26
AP4E1-202ENST00000558439 IGKV1D-8A0A087WSZ0 117 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
AP4E1-202ENST00000558439 ZIC3O60481 467 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 MBPP02686 304 aaPredicted RBP13.43□□□□□ -0.26
AP4E1-202ENST00000558439 HKR1P10072 659 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 ARR3P36575 388 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 NAAAQ02083 359 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 RSRP1Q9BUV0 290 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 EDEM2Q9BV94 578 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 HES7Q9BYE0 225 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 IGLV3-12A0A075B6K2 115 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 MECP2P51608 486 aaKnown RBP13.43□□□□□ -0.26
AP4E1-202ENST00000558439 HBG1P69891 147 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 HBG2P69892 147 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 AWAT1Q58HT5 328 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 LFNGQ8NES3 379 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 SEC11CQ9BY50 192 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 STRAPQ9Y3F4 350 aaKnown RBP13.43□□□□□ -0.26
AP4E1-202ENST00000558439 PCNX3Q9H6A9 2034 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 SPP1P10451 314 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 FGF5P12034 268 aa13.43□□□□□ -0.26
AP4E1-202ENST00000558439 SRSF3P84103 164 aaKnown RBP13.43□□□□□ -0.26
AP4E1-202ENST00000558439 KRASP01116 189 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 HBE1P02100 147 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 ZNF708P17019 499 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 NOVA1P51513 510 aaKnown RBP13.42□□□□□ -0.26
AP4E1-202ENST00000558439 ZXDAP98168 799 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 CSRP2Q16527 193 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 HIST2H3PS2Q5TEC6 136 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 TMPRSS7Q7RTY8 843 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 TMEM230Q96A57 120 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 LYZL4Q96KX0 146 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 Q96M66 194 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 PFDN5Q99471 154 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 S100PP25815 95 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 OR52M1Q8NGK5 317 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 TAAR9Q96RI9 348 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 RTL8AQ9BWD3 113 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 hCG_1809904A0A1W2PP81 198 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 A0A1W2PR64 198 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 A0A1W2PRV1 198 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 CHST1O43916 411 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 DFFBO76075 338 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 SCTP09683 121 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 MPLP40238 635 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 GNG3P63215 75 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 OR8G1Q15617 311 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 C4orf17Q53FE4 359 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 SSX9Q7RTT3 188 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 C1orf210Q8IVY1 113 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 FAM58AQ8N1B3 248 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 RFESDQ8TAC1 157 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 SLX1AQ9BQ83 275 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 OSGIN2Q9Y236 505 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 NAT1P18440 290 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 BAXQ07812 192 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 HIKESHIQ53FT3 197 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 OR1J1Q8NGS3 322 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 ERGIC1Q969X5 290 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 C10orf35Q96D05 121 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 GNPNAT1Q96EK6 184 aaPredicted RBP13.42□□□□□ -0.26
AP4E1-202ENST00000558439 ENY2Q9NPA8 101 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 ZNF391Q9UJN7 358 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 KIAA1549LQ6ZVL6 1849 aa13.42□□□□□ -0.26
AP4E1-202ENST00000558439 PIGBOS1A0A0B4J2F0 54 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 A0A1W2PPH5 198 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 C7orf77A4D0Y5 90 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms