RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 NPBWR2P48146 333 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 RAB7AP51149 207 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 ATP1B3P54709 279 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 MADCAM1Q13477 382 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 ODF4Q2M2E3 257 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 FAM98BQ52LJ0 330 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 KRBOX4Q5JUW0 171 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 ZNF322Q6U7Q0 402 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 OR8H3Q8N146 312 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 RNFT2Q96EX2 444 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 CNN2Q99439 309 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 APOL4Q9BPW4 351 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.17
TSPAN3-204ENST00000558394 H3BSH0 61 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 SRSF10O75494 262 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 OR2H2O95918 312 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 RBP2P50120 134 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 CXCR4P61073 352 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 SCN1BQ07699 218 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 GK3PQ14409 553 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 SPATS1Q496A3 300 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 Q6ZSR3 168 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 OR11H1Q8NG94 326 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 ACTR3BQ9P1U1 418 aa13.95□□□□□ -0.18
TSPAN3-204ENST00000558394 A0A1W2PPI3 338 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 LINC01548A6NM66 108 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 J3QR06 171 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 JTBO76095 146 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 OSMP13725 252 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 ZNF44P15621 663 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 ATP6V1B2P21281 511 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 CCL1P22362 96 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 GPR12P47775 334 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 CDK5Q00535 292 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 C16orf89Q6UX73 402 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 ZNF429Q86V71 674 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 CHST5Q9GZS9 411 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 NDE1Q9NXR1 346 aa13.94□□□□□ -0.18
TSPAN3-204ENST00000558394 MAGEB4O15481 346 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 RPP14O95059 124 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 VDAC1P21796 283 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 MNAT1P51948 309 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 FHL3Q13643 280 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 TGIF2LXQ8IUE1 241 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 MNTQ99583 582 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 TVP23BQ9NYZ1 205 aa13.93□□□□□ -0.18
TSPAN3-204ENST00000558394 KBTBD11-OT1A0A1B0GTJ5 212 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 CCDC182A6NF36 153 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 ZNF670-ZNF695F2Z2N8 137 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 GNGT2O14610 69 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 MPZL2O60487 215 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 IGHV3-7P01780 117 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 OCM2P0CE71 109 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 OCMP0CE72 109 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 MTCP1P56278 107 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 MOB3BQ86TA1 216 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 SLC35F2Q8IXU6 374 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 DEFB107AQ8IZN7 70 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 RNF152Q8N8N0 203 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 CCDC54Q8NEL0 328 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 DNAAF1Q8NEP3 725 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 KIRREL1Q96J84 757 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 HMG20AQ9NP66 347 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 ISYNA1Q9NPH2 558 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 ZNF446Q9NWS9 450 aa13.92□□□□□ -0.18
TSPAN3-204ENST00000558394 CST1P01037 141 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 CSN2P05814 226 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 HCKP08631 526 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 GLP1RP43220 463 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 GNG10P50151 68 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 ATXN7L3Q14CW9 347 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 HSP90B2PQ58FF3 399 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 UTF1Q5T230 341 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 TMEM236Q5W0B7 351 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 YIPF7Q8N8F6 280 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 CHST4Q8NCG5 386 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 OR1N2Q8NGR9 330 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 PP6455Q8WZ26 134 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 C10orf35Q96D05 121 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 RASL11BQ9BPW5 248 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 KRTAP17-1Q9BYP8 105 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 CHCHD3Q9NX63 227 aaKnown RBP13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 STARD9Q9P2P6 4700 aa13.91□□□□□ -0.18
TSPAN3-204ENST00000558394 TCRBV5S2A0A599 114 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 SAP30O75446 220 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms