RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 C17orf107Q6ZR85 190 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 BTN2A1Q7KYR7 527 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 GLCCI1Q86VQ1 547 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 OR8H2Q8N162 312 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 ST8SIA4Q92187 359 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 FAM46BQ96A09 425 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 TMEM186Q96B77 213 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 KCTD12Q96CX2 325 aaKnown RBP8.69□□□□□ -1.02
LRRC28-204ENST00000558172 SHARPINQ9H0F6 387 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 DCSTAMPQ9H295 470 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 NDUFA13Q9P0J0 144 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 ABRACLQ9P1F3 81 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 DUX4Q9UBX2 424 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 CEPT1Q9Y6K0 416 aa8.69□□□□□ -1.02
LRRC28-204ENST00000558172 TMEM272A0A1B0GTI8 110 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 TMEM82A0PJX8 343 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 SMIM30A4D0T7 59 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 METTL21EPA6NDL7 271 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 PSPNO60542 156 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 TFF1P04155 84 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 CSN2P05814 226 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 SELLP14151 372 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 ERP29P30040 261 aaKnown RBP8.68□□□□□ -1.02
LRRC28-204ENST00000558172 DYNC1I2Q13409 638 aaKnown RBP8.68□□□□□ -1.02
LRRC28-204ENST00000558172 GRK1Q15835 563 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 PAN3Q58A45 887 aaKnown RBP8.68□□□□□ -1.02
LRRC28-204ENST00000558172 ATAD3CQ5T2N8 411 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 IDNKQ5T6J7 187 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 OR10K2Q6IF99 312 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 BTNL3Q6UXE8 466 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 FAM89BQ8N5H3 189 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 OR56B1Q8NGI3 324 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 C8orf46Q8TAG6 207 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 ISOC1Q96CN7 298 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 DCTN5Q9BTE1 182 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 BARHL1Q9BZE3 327 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 LPAR5Q9H1C0 372 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 LPAR2Q9HBW0 351 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 RCC2Q9P258 522 aaKnown RBP8.68□□□□□ -1.02
LRRC28-204ENST00000558172 LPAR3Q9UBY5 353 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 ETV7Q9Y603 341 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 HIVEP2P31629 2446 aa8.68□□□□□ -1.02
LRRC28-204ENST00000558172 TRAV24A0A0B4J272 114 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 IGHV2-70DA0A0C4DH43 119 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 A0A0G2JMP0 313 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 A0A0X1KG70 313 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 KIR2DS1A0A191URI9 304 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 CCDC160A6NGH7 325 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 MCRIP1C9JLW8 97 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 J3QLI3 93 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 ZNF701M0R085 212 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 ENSAO43768 121 aaKnown RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 FCN3O75636 299 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 SCGNO76038 276 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 ZNF182P17025 639 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 FUT3P21217 361 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 SOX6P35712 828 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 OR3A1P47881 315 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 PAX2Q02962 417 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 MEF2CQ06413 473 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 PDCD1Q15116 288 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 DCAF12L2Q5VW00 463 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 CLEC9AQ6UXN8 241 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 SUMF2Q8NBJ7 301 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 LY6G5BQ8NDX9 201 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 OR4S1Q8NGB4 309 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 OR4M2Q8NGB6 313 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 ACOT12Q8WYK0 555 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 H1FXQ92522 213 aaKnown RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 AP3S1Q92572 193 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 NEDD4LQ96PU5 975 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 DPCDQ9BVM2 203 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 NCOR1P1Q9H4R4 102 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 HIF1ANQ9NWT6 349 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 RPUSD1Q9UJJ7 312 aaKnown RBP8.67□□□□□ -1.02
LRRC28-204ENST00000558172 KCNS2Q9ULS6 477 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 SPATA2Q9UM82 520 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 INSIG2Q9Y5U4 225 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 PEX16Q9Y5Y5 336 aa8.67□□□□□ -1.02
LRRC28-204ENST00000558172 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 H3BMQ9 156 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 PDCD6O75340 191 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 CA11O75493 328 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 LY6G6DO95868 133 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 SNRPBP14678 240 aaKnown RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 BLVRBP30043 206 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 VEGFCP49767 419 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 EDDM3BP56851 147 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 RPL31P62899 125 aaKnown RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 PAX5Q02548 391 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms