RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 DYNC1I2Q13409 638 aaKnown RBP7.38□□□□□ -1.23
SPG11-207ENST00000558138 IL13RA2Q14627 380 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 DEFB112Q30KQ8 113 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 FAM27D1Q5T7N8 215 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 ASPHD2Q6ICH7 369 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 USP43Q70EL4 1123 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 SLC25A28Q96A46 364 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 FOXRED1Q96CU9 486 aaPredicted RBP7.38□□□□□ -1.23
SPG11-207ENST00000558138 DMRTB1Q96MA1 342 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 ZNF714Q96N38 554 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 C19orf24Q9BVV8 132 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 YTHDF1Q9BYJ9 559 aaKnown RBP7.38□□□□□ -1.23
SPG11-207ENST00000558138 GAL3ST2Q9H3Q3 398 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 HEXA-AS1Q9H8Q6 139 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 ACOT13Q9NPJ3 140 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 MEIKINA0A087WXM9 373 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 A0A0G2JK05 382 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 A0A0U1RQK1 487 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 DNAJC9-AS1A6NH13 148 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 SLC33A1O00400 549 aaPredicted RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 NPFFO15130 113 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 PIN1P1O15428 100 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 HOXA3O43365 443 aaPredicted RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 ZNF737O75373 536 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 GPX5O75715 221 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 ARG1P05089 322 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 CRYBA1P05813 215 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 FBP1P09467 338 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 ZNF728P0DKX0 622 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 SRMP19623 302 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 PRTN3P24158 256 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 GABRA5P31644 462 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 RBM11P57052 281 aaKnown RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 EMX1Q04741 257 aaPredicted RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 MEF2CQ06413 473 aaPredicted RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 TPBGQ13641 420 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 KRTAP24-1Q3LI83 254 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 ELP2Q6IA86 826 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 C17orf107Q6ZR85 190 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 LINC00596Q86U02 117 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 PHC2Q8IXK0 858 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 PNKDQ8N490 385 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 Q8N7P7 452 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 OR4D6Q8NGJ1 314 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 OR13D1Q8NGV5 346 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 FCGR1BQ92637 280 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 FAM46BQ96A09 425 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 UQCC2Q9BRT2 126 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 BARHL1Q9BZE3 327 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 SELENOIQ9C0D9 397 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 CST11Q9H112 138 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 BANF2Q9H503 90 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 ZMAT3Q9HA38 289 aaKnown RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 VCX3AQ9NNX9 186 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 IL36GQ9NZH8 169 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 LRRC42Q9Y546 428 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 SOX21Q9Y651 276 aaPredicted RBP7.37□□□□□ -1.23
SPG11-207ENST00000558138 LINC00312Q9Y6C7 94 aa7.37□□□□□ -1.23
SPG11-207ENST00000558138 RNASEK-C17orf49H0YIS7 233 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 CCRL2O00421 344 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 PDCD5O14737 125 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 GEMIN2O14893 280 aaKnown RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 CLPXO76031 633 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 MPIG6BO95866 241 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 UBBP0CG47 229 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 ERP29P30040 261 aaKnown RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 RANBP1P43487 201 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 GLIPR1P48060 266 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 UBE2E1P51965 193 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 UBA52P62987 128 aaKnown RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 FABP5Q01469 135 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 NEDD8Q15843 81 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 RAB11BQ15907 218 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 TAF9Q16594 264 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 LTC4SQ16873 150 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 MPV17LQ2QL34 196 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 Q6P435 159 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 CRIP3Q6Q6R5 217 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 C1orf122Q6ZSJ8 110 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 C9orf139Q6ZV77 190 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 CDH26Q8IXH8 852 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 SUMF2Q8NBJ7 301 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 OR51T1Q8NGJ9 327 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 PHYHIPQ92561 330 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 GCDHQ92947 438 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 ZNF48Q96MX3 618 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 MDFIQ99750 246 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 DPCDQ9BVM2 203 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 SEBOXQ9HB31 216 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 SPACA1Q9HBV2 294 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 OR6C3Q9NZP0 311 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 GHRLQ9UBU3 117 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 UBE2J1Q9Y385 318 aaPredicted RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 AK6Q9Y3D8 172 aaKnown RBP7.36□□□□□ -1.23
SPG11-207ENST00000558138 SVEP1Q4LDE5 3571 aa7.36□□□□□ -1.23
SPG11-207ENST00000558138 A0A1W2PP11 408 aa7.35□□□□□ -1.23
SPG11-207ENST00000558138 ODAMA1E959 279 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms