RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RBP2P50120 134 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 SNU13P55769 128 aaKnown RBP14.36□□□□□ -0.11
ABCD4-228ENST00000557588 FOXE3Q13461 319 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 PNLIPRP3Q17RR3 467 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 C17orf58Q2M2W7 97 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 ZNF260Q3ZCT1 412 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 CXorf66Q5JRM2 361 aaPredicted RBP14.36□□□□□ -0.11
ABCD4-228ENST00000557588 TMEM236Q5W0B7 351 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 TMEM179BQ7Z7N9 219 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 OR8H3Q8N146 312 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 CCDC54Q8NEL0 328 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 COQ2Q96H96 371 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 CITED4Q96RK1 184 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 ELAC2Q9BQ52 826 aaKnown RBP14.36□□□□□ -0.11
ABCD4-228ENST00000557588 GON7Q9BXV9 100 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 HMG20AQ9NP66 347 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 TAGLN3Q9UI15 199 aa14.36□□□□□ -0.11
ABCD4-228ENST00000557588 SH2D1BO14796 132 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 IGKV1D-33P01593 117 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 IGKV1-33P01594 117 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 CALCBP10092 127 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 RAP2AP10114 183 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 GPR12P47775 334 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 POU3F4P49335 361 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 RAB7AP51149 207 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 INSL3P51460 131 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 MADCAM1Q13477 382 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 SLC35F2Q8IXU6 374 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 C4orf3Q8WVX3 66 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 C10orf35Q96D05 121 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 COMMD4Q9H0A8 199 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 ADGRL4Q9HBW9 690 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 SORL1Q92673 2214 aa14.35□□□□□ -0.11
ABCD4-228ENST00000557588 KBTBD11-OT1A0A1B0GTJ5 212 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 LINC01548A6NM66 108 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 J3QR06 171 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 LY86O95711 162 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 SERPINA3P01011 423 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 CST1P01037 141 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 ELANEP08246 267 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 NFYBP25208 207 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 GPR50Q13585 617 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 DIAPH2-AS1Q14236 149 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 HNF4GQ14541 408 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 ODF4Q2M2E3 257 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 KRBOX4Q5JUW0 171 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 DHFR2Q86XF0 187 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 CATSPERDQ86XM0 798 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 TGIF2LXQ8IUE1 241 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 PP6455Q8WZ26 134 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 HRASLS5Q96KN8 279 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 ZNF556Q9HAH1 456 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 CLN6Q9NWW5 311 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 TVP23BQ9NYZ1 205 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 OR6C3Q9NZP0 311 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 GSTK1Q9Y2Q3 226 aa14.34□□□□□ -0.11
ABCD4-228ENST00000557588 ZNF670-ZNF695F2Z2N8 137 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 H3BSH0 61 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 ATP1B3P54709 279 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 CFHR3Q02985 330 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 ABCG5Q9H222 651 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 LIN7CQ9NUP9 197 aaKnown RBP14.33□□□□□ -0.12
ABCD4-228ENST00000557588 ARL8BQ9NVJ2 186 aa14.33□□□□□ -0.12
ABCD4-228ENST00000557588 IGKV1-9A0A0C4DH69 117 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 RPP14O95059 124 aaKnown RBP14.32□□□□□ -0.12
ABCD4-228ENST00000557588 CGB3P0DN86 165 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 CGB7P0DN87 165 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 MNAT1P51948 309 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 EBI3Q14213 229 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 ZFAND6Q6FIF0 208 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 MEPCEQ7L2J0 689 aaKnown RBP14.32□□□□□ -0.12
ABCD4-228ENST00000557588 HS3ST5Q8IZT8 346 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 CHST4Q8NCG5 386 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 PPIL3Q9H2H8 161 aaKnown RBP14.32□□□□□ -0.12
ABCD4-228ENST00000557588 ZMAT4Q9H898 229 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 LINC00574Q9H8X3 128 aa14.32□□□□□ -0.12
ABCD4-228ENST00000557588 NKX1-2Q9UD57 310 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-228ENST00000557588 IGKV1-12A0A0C4DH73 117 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 LOC107986453A0A1B0GWG9 222 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 SLC33A1O00400 549 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-228ENST00000557588 PRKYO43930 277 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 KDM4BO94953 1096 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 IGKV1D-12P01611 117 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 IGHG4P01861 327 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 KRT8P05787 483 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 FRMD6-AS1P0C7T7 363 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 ZNF44P15621 663 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 MTCP1P56278 107 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 MS4A2Q01362 244 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 PDZK1IP1Q13113 114 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 TRIM25Q14258 630 aaKnown RBP14.31□□□□□ -0.12
ABCD4-228ENST00000557588 ATXN7L3Q14CW9 347 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-228ENST00000557588 LHFPL2Q6ZUX7 228 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 SSX6Q7RTT6 188 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 IZUMO1Q8IYV9 350 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 ARHGAP24Q8N264 748 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 Q8N6K4 173 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 HAVCR2Q8TDQ0 301 aa14.31□□□□□ -0.12
ABCD4-228ENST00000557588 LEAP2Q969E1 77 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms