RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 COL21A1Q96P44 957 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 OR52B2Q96RD2 323 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 FMO2Q99518 471 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 SORT1Q99523 831 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 KCTD14Q9BQ13 255 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 TM6SF2Q9BZW4 377 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 SELENOIQ9C0D9 397 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 RGCCQ9H4X1 137 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 KIR3DX1Q9H7L2 352 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 ABCB9Q9NP78 766 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM138Q9NPI0 162 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 PRSS16Q9NQE7 514 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 AIG1Q9NVV5 245 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 TAS2R9Q9NYW1 312 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 PTTG3PQ9NZH4 202 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 PCYOX1Q9UHG3 505 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 COL5A1P20908 1838 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 LAMA5O15230 3695 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 SCN1AP35498 2009 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 HELZ2Q9BYK8 2649 aaKnown RBP3.2□□□□□ -1.9
PRPF39-212ENST00000557477 HECTD1Q9ULT8 2610 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 SHROOM3Q8TF72 1996 aa3.2□□□□□ -1.9
PRPF39-212ENST00000557477 URB1O60287 2271 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 DENND4CQ5VZ89 1909 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PLXNB3Q9ULL4 1909 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 A0A0G2JLM5 398 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1B0GV72 72 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PSMB11A5LHX3 300 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PRAMEF26H0Y7S4 382 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 MKRN2OSH3BPM6 223 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 K7EP13 123 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 COPEO14579 308 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 RAD51CO43502 376 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 EDF1O60869 148 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 GADD45GO95257 159 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 IGLV3-19P01714 112 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 NBEAP1P0C6P0 100 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CISD3P0C7P0 127 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CCL2P13500 99 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PVALBP20472 110 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CNR1P21554 472 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 MSR1P21757 451 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 GABRR1P24046 479 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OTX1P32242 354 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CD70P32970 193 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 NAA10P41227 235 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 MAP2K4P45985 399 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 RPL23AP62750 156 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 RAP1AP62834 184 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 IL5RAQ01344 420 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OGDHQ02218 1023 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TLE4Q04727 773 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ADIGQ0VDE8 80 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 BST1Q10588 318 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 MAB21L1Q13394 359 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR5I1Q13606 314 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 RCAN2Q14206 197 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TAF1AQ15573 450 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 DEFB133Q30KQ1 61 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 VPS26BQ4G0F5 336 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PTPN20Q4JDL3 420 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PRAMEF5Q5TYX0 476 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PRAMEF6Q5VXH4 476 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OTPQ5XKR4 325 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 FBXW9Q5XUX1 488 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ULK3Q6PHR2 472 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PLET1Q6UQ28 207 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TEX261Q6UWH6 196 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 FAM151BQ6UXP7 276 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 RASSF6Q6ZTQ3 369 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CLEC20AQ6ZU45 233 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF571Q7Z3V5 609 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 VTCN1Q7Z7D3 282 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CPNE9Q8IYJ1 553 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ZFP82Q8N141 532 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 GDPD1Q8N9F7 314 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CCDC71LQ8N9Z2 235 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 SDR9C7Q8NEX9 313 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR8J3Q8NGG0 315 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR5T3Q8NGG3 340 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR51S1Q8NGJ8 323 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR5J2Q8NH18 312 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR4C6Q8NH72 309 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 NEIL3Q8TAT5 605 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 LMX1AQ8TE12 382 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ZFP90Q8TF47 636 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 DCAKDQ8WVC6 231 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CCDC124Q96CT7 223 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 CMTM5Q96DZ9 223 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 SMIM12Q96EX1 92 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 BTN2A3PQ96KV6 586 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 HYLS1Q96M11 299 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 Q96MT0 163 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 HIST1H4GQ99525 98 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 VAT1Q99536 393 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms