RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 BLOC1S5-TXNDC5H3BN57 136 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 LGALS8O00214 317 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 IMPA2O14732 288 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 CDIPTO14735 213 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 MRASO14807 208 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ARPC3O15145 178 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF208O43345 1280 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SOX15O60248 233 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TPST1O60507 370 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 FADS2O95864 444 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ABHD2P08910 425 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PPIAL4FP0DN26 164 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ANXA3P12429 323 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ARSBP15848 533 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 GSTM3P21266 225 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DCTDP32321 178 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 CD80P33681 288 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 GLRXP35754 106 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 IFNGR2P38484 337 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 LIPAP38571 399 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 NPY4RP50391 375 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ERVS71-1P61550 626 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 RAB32Q13637 225 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 FCN2Q15485 313 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SURF2Q15527 256 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF141Q15928 474 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 HIST2H3PS2Q5TEC6 136 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SUMO4Q6EEV6 95 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM225Q6GV28 225 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 LEG1Q6P5S2 330 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PAQR6Q6TCH4 344 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 LRRC28Q86X40 367 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 BAP18Q8IXM2 172 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 UBAC2Q8NBM4 344 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 OR9K2Q8NGE7 335 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 OR2G2Q8NGZ5 317 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 COQ8AQ8NI60 647 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SCARB1Q8WTV0 552 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 CCDC107Q8WV48 283 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 POP5Q969H6 163 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TAAR8Q969N4 342 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 RCN3Q96D15 328 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 HAVCR1Q96D42 359 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 CCDC126Q96EE4 140 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 MRPS24Q96EL2 167 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 RNFT2Q96EX2 444 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 C5orf30Q96GV9 206 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SLC41A3Q96GZ6 507 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM56Q96MV1 263 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ALKBH3Q96Q83 286 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ALKBH7Q9BT30 221 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 THAP7Q9BT49 309 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 OR11A1Q9GZK7 315 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SLIRPQ9GZT3 109 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 PRO1933Q9H354 126 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TPT1P8Q9HAU6 139 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 BEX1Q9HBH7 125 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 C1orf109Q9NX04 203 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 DNAJB11Q9UBS4 358 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 SMPXQ9UHP9 88 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF346Q9UL40 294 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 NDRG4Q9ULP0 352 aaKnown RBP4.1□□□□□ -1.75
ATXN3-247ENST00000557311 KCNE3Q9Y6H6 103 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 V9GYS6 101 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 EXPH5Q8NEV8 1989 aa4.1□□□□□ -1.75
ATXN3-247ENST00000557311 TMED7-TICAM2A0A0A6YYA0 188 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 EXOC1LA0A1B0GW35 172 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 A8MWP6 167 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SEC14L6B5MCN3 397 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RPL36A-HNRNPH2H7BZ11 118 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 K7ERU9 68 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CXCR6O00574 342 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 UBDO15205 165 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OGG1O15527 345 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 FCMRO60667 390 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 UPK3AO75631 287 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RP2O75695 350 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 IGHV2-5P01817 119 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SNRPCP09234 159 aaKnown RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 G6PDP11413 515 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 EFNA1P20827 205 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PRPH2P23942 346 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SLC6A1P30531 599 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PMELP40967 661 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 AKR1C3P42330 323 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CRYBB2P43320 205 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR3A1P47881 315 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MTNR1AP48039 350 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RPL14P50914 215 aaKnown RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 ATP4BP51164 291 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RPS23P62266 143 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms