RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 IGLV1-47P01700 117 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 KRT8P05787 483 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 NHLRC4P0CG21 123 aaPredicted RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 PRKACGP22612 351 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 ATP1B3P54709 279 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 P2RX3P56373 397 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 KRTAP10-11P60412 298 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 PTGES3Q15185 160 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 UBE2V2Q15819 145 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 GRK1Q15835 563 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 AADACL4Q5VUY2 407 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 CCDC121Q6ZUS5 278 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 CATSPERDQ86XM0 798 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 GID4Q8IVV7 300 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 OSR2Q8N2R0 312 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 OR52N4Q8NGI2 321 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 PP6455Q8WZ26 134 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 EMG1Q92979 244 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 BORCS8Q96FH0 119 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 ADI1Q9BV57 179 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 CADM1Q9BY67 442 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 PLEKHA1Q9HB21 404 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 ADGRL4Q9HBW9 690 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 PAPOLBQ9NRJ5 636 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 PCDHB16Q9NRJ7 776 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 ZFP57Q9NU63 452 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 MRM2Q9UI43 246 aaKnown RBP6.89□□□□□ -1.31
VRK1-206ENST00000557222 GTF2A1LQ9UNN4 478 aa6.89□□□□□ -1.31
VRK1-206ENST00000557222 IGKV1-27A0A075B6S5 117 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 A0A087X0M5 115 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 TRGV10A0A0A0MS01 117 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 A0A1B0GX30 115 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 LY6LH3BQJ8 138 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 SH2D1BO14796 132 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 PRKYO43930 277 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 AMY1AP04745 511 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 AMY2AP04746 511 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 CSN2P05814 226 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 LPLP06858 475 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 OR2T7P0C7T2 308 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 PRKACBP22694 351 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 GABRR1P24046 479 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 LMO1P25800 156 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 MNDAP41218 407 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 RBP2P50120 134 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 PRRX1P54821 245 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 CD69Q07108 199 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 EDDM3AQ14507 147 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 ABCA11PQ4W5N1 156 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 FAHD1Q6P587 224 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 UTS2BQ765I0 119 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 HS3ST5Q8IZT8 346 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 FAM58AQ8N1B3 248 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 COMMD1Q8N668 190 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 TRMT10AQ8TBZ6 339 aaKnown RBP6.88□□□□□ -1.31
VRK1-206ENST00000557222 TMEM163Q8TC26 289 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 SLAMF9Q96A28 289 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 WARS2Q9UGM6 360 aaKnown RBP6.88□□□□□ -1.31
VRK1-206ENST00000557222 ENOPH1Q9UHY7 261 aa6.88□□□□□ -1.31
VRK1-206ENST00000557222 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A18PA6NE21 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A16PA6NEW6 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A20PA6NIJ5 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 A6NIN4 97 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 METTL15A6NJ78 407 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A9PA6NNJ1 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A12PA8MX19 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A5PA8MXJ8 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 TOR1AO14656 332 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 ENTPD6O75354 484 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 MMP23AO75900 390 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A15PP0C7V4 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A13PP0C7W8 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A14PP0C7W9 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM90A24PP0C7X0 464 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 UBCP0CG48 685 aaKnown RBP6.87□□□□□ -1.31
VRK1-206ENST00000557222 FAM106CPP0CH98 169 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 T-ENOLP0DO92 83 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CDK2P24941 298 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 MYCNOSP40205 109 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 OR3A1P47881 315 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 THBS3P49746 956 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CBX1P83916 185 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 TMED1Q13445 227 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 LSAMPQ13449 338 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 HLA-DRB5Q30154 266 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 C11orf87Q6NUJ2 197 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 UNQ9370/PRO34162Q6UXP9 181 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 LHFPL2Q6ZUX7 228 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 TRAPPC6BQ86SZ2 158 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 BATF2Q8N1L9 274 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 TCEANCQ8N8B7 351 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 YIPF7Q8N8F6 280 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CHST4Q8NCG5 386 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CHPT1Q8WUD6 406 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 SPSB1Q96BD6 273 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CCDC124Q96CT7 223 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms