RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MDP1Q86V88 176 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 HOGA1Q86XE5 327 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZNF573Q86YE8 665 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 LURAP1LQ8IV03 231 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZDHHC23Q8IYP9 409 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 C17orf78Q8N4C9 275 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 BPIFB2Q8N4F0 458 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ARRDC1Q8N5I2 433 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CNEP1R1Q8N9A8 125 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 Q8NFD4 153 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 OR4C16Q8NGL9 310 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 OR51F2Q8NH61 342 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PRSS3P2Q8NHM4 247 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TERB2Q8NHR7 220 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 NPRL2Q8WTW4 380 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 GIMAP1Q8WWP7 306 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CMBLQ96DG6 245 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAHD2AQ96GK7 314 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 ARHGAP5-AS1Q96IT6 56 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 RADILQ96JH8 1075 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 GPR137Q96N19 417 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 NKX3-1Q99801 234 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PECRQ9BY49 303 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CHST6Q9GZX3 395 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 KCNK15Q9H427 330 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PLK3Q9H4B4 646 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 RHOFQ9HBH0 211 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CDH20Q9HBT6 801 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PLEKHJ1Q9NW61 149 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 SLC2A8Q9NY64 477 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZNF222Q9UK12 451 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 KLK13Q9UKR3 277 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PROCRQ9UNN8 238 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FLVCR2Q9UPI3 526 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ASCC3Q8N3C0 2202 aaKnown RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 MYO9AB2RTY4 2548 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CCDC88CQ9P219 2028 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 IGKV1-27A0A075B6S5 117 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MEIS3P1A6NDR6 274 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MBD3L4A6NDZ8 208 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 MBD3L3A6NE82 208 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 MBD3L5A6NJ08 208 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR5B21A6NL26 309 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 FOXI3A8MTJ6 420 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 A8MV72 311 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF732B4DXR9 585 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TRAPPC2LH3BP13 241 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 M0QYG6 137 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MFNGO00587 321 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 FABP7O15540 132 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR2A4O95047 310 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 NGFP01138 241 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 CGAP01215 116 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 GLAP06280 429 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF735P0CB33 412 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 CCL2P13500 99 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF14P17017 642 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 ANXA7P20073 488 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 SERPINA2P20848 420 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 C4BPBP20851 252 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 IGHV1-2P23083 117 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ANOS1P23352 680 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TIMP3P35625 211 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SNU13P55769 128 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 UCP2P55851 309 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TAS2R31P59538 309 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 GMFBP60983 142 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 UBE2MP61081 183 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 TSPAN5P62079 268 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 GNG3P63215 75 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SURF2Q15527 256 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 MPPED2Q15777 294 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TAF9Q16594 264 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 CHRFAM7AQ494W8 412 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SCGB2B2Q4G0G5 96 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MIDNQ504T8 468 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 C4orf46Q504U0 113 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TMEM255AQ5JRV8 349 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 C1orf185Q5T7R7 199 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 TMEM211Q6ICI0 200 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 LIN54Q6MZP7 749 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 C11orf88Q6PI97 169 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SLC25A26Q70HW3 274 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SSX8Q7RTT4 187 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 RNF144BQ7Z419 303 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SLC25A42Q86VD7 318 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 GCNT2Q8N0V5 402 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 FBXL14Q8N1E6 418 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 RBMXL3Q8N7X1 1067 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZDHHC22Q8N966 263 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SPERTQ8NA61 448 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 BEST4Q8NFU0 473 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR4S1Q8NGB4 309 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms