RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 EFNB1P98172 346 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 ZNF91Q05481 1191 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 TMED1Q13445 227 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 UBE2V2Q15819 145 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 MEDAGQ5VYS4 303 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 C18orf65Q6ZTR6 163 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 ZNF695Q8IW36 515 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 KLHL30-AS1Q8NEE0 82 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 CORO2AQ92828 525 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 HRASLS5Q96KN8 279 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 APOL4Q9BPW4 351 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 PLEKHA1Q9HB21 404 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 ADGRL4Q9HBW9 690 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 CLN6Q9NWW5 311 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 TAS2R3Q9NYW6 316 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 GMPPBQ9Y5P6 360 aa9.4□□□□□ -0.9
ACTN1-221ENST00000556571 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 MPZL2O60487 215 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 SERPINA3P01011 423 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 KRT8P05787 483 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 OR2T7P0C7T2 308 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A15PP0C7V4 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A13PP0C7W8 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A14PP0C7W9 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM90A24PP0C7X0 464 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 DUSP1P28562 367 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 OR3A1P47881 315 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 SLC35B1P78383 322 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 ZNF146Q15072 292 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 RCN1Q15293 331 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 SPIN3Q5JUX0 258 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 FAM58AQ8N1B3 248 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 OR10H4Q8NGA5 316 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 BORCS8Q96FH0 119 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 Q96MT0 163 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-221ENST00000556571 TBX5Q99593 518 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 ZNF286AQ9HBT8 521 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 PCDHB16Q9NRJ7 776 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 IL36RNQ9UBH0 155 aa9.39□□□□□ -0.91
ACTN1-221ENST00000556571 KIAA2026Q5HYC2 2103 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 A0A087X0M5 115 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 A0A1B0GX30 115 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 CCL24O00175 119 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 SH2D1BO14796 132 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 MAGEB4O15481 346 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 SYT7O43581 403 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 ENTPD6O75354 484 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 APOL3O95236 402 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 CYB5AP00167 134 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 NPBWR2P48146 333 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 RAB25P57735 213 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 SNRPGP62308 76 aaKnown RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 LRRC36Q1X8D7 754 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 C9orf66Q5T8R8 295 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 PLEKHG7Q6ZR37 379 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 YIPF7Q8N8F6 280 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 CCDC54Q8NEL0 328 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 MUC7Q8TAX7 377 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 RAX2Q96IS3 184 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 RDH12Q96NR8 316 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 PRR25Q96S07 402 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 MBOAT4Q96T53 435 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 MYCBPQ99417 103 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 ASCL2Q99929 193 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 CHST5Q9GZS9 411 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 C8orf4Q9NR00 106 aa9.38□□□□□ -0.91
ACTN1-221ENST00000556571 RBFOX1Q9NWB1 397 aaKnown RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 SMPD3Q9NY59 655 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 MRM2Q9UI43 246 aaKnown RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 DYNC2H1Q8NCM8 4307 aaKnown RBP9.38□□□□□ -0.91
ACTN1-221ENST00000556571 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 SIRPB1O00241 398 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 FGF16O43320 207 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 SNRNP70P08621 437 aaKnown RBP9.37□□□□□ -0.91
ACTN1-221ENST00000556571 PRKACAP17612 351 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 BCL3P20749 454 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 CHATP28329 748 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 GDNFP39905 211 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 PTGFRP43088 359 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 RBP2P50120 134 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-221ENST00000556571 ATP1B3P54709 279 aa9.37□□□□□ -0.91
ACTN1-221ENST00000556571 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms