RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SLC25A46Q96AG3 418 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 ISOC1Q96CN7 298 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 Q96M66 194 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 C1orf147Q96MC9 270 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 TMUB1Q9BVT8 246 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 TM2D1Q9BX74 207 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 BARHL1Q9BZE3 327 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 IFT22Q9H7X7 185 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 IL36RNQ9UBH0 155 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 CTSZQ9UBR2 303 aa6.35□□□□□ -1.39
TDP1-214ENST00000556063 RSL24D1Q9UHA3 163 aaKnown RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
TDP1-214ENST00000556063 SONP18583 2426 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 ABCA2Q9BZC7 2435 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A0G2JMP0 313 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A0X1KG70 313 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 TMEM272A0A1B0GTI8 110 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PP11 408 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 hCG_1809904A0A1W2PP81 198 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PPE2 198 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PQ09 198 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PR64 198 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 A0A1W2PRV1 198 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 hADV38S2A0JD32 116 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 FAM157AC9JC47 383 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 SLC33A1O00400 549 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 GEMIN2O14893 280 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 PHF1O43189 567 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 CD5LO43866 347 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 PDCD6O75340 191 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 ZNF737O75373 536 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 CA11O75493 328 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 CSN2P05814 226 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 ZNF182P17025 639 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 ERP29P30040 261 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 BLVRBP30043 206 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 IL2RGP31785 369 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 EDDM3BP56851 147 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 SEC61A1P61619 476 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 QRFPP83859 136 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 MEF2CQ06413 473 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 RAB12Q6IQ22 244 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 Q6P435 159 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 ZNF841Q6ZN19 808 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 BTN2A1Q7KYR7 527 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 NR2C2APQ86WQ0 139 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 CMTM4Q8IZR5 234 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 OR4M2Q8NGB6 313 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 RAB40AQ8WXH6 277 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 TMEM186Q96B77 213 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 MSI2Q96DH6 328 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 DPCDQ9BVM2 203 aaPredicted RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 LPAR2Q9HBW0 351 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 HIF1ANQ9NWT6 349 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 RPUSD1Q9UJJ7 312 aaKnown RBP6.34□□□□□ -1.39
TDP1-214ENST00000556063 KCNS2Q9ULS6 477 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 PEX16Q9Y5Y5 336 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 CEPT1Q9Y6K0 416 aa6.34□□□□□ -1.39
TDP1-214ENST00000556063 NAV3Q8IVL0 2385 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 A0A0A6YYH2 397 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 TRAV24A0A0B4J272 114 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 IGHV2-70DA0A0C4DH43 119 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 KIR2DS1A0A191URI9 304 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 TMEM82A0PJX8 343 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 A6NJ64 397 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 KIAA1324LA8MWY0 1029 aaPredicted RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 H3BMQ9 156 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 J3QLI3 93 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 LDLRAD4O15165 306 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 PSPNO60542 156 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 TFF1P04155 84 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 SELLP14151 372 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 ZFP36P26651 326 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 TGFBR1P36897 503 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 OR3A1P47881 315 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 P2RX3P56373 397 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 RPL31P62899 125 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 MRPS15P82914 257 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 UNC119Q13432 240 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 EDDM3AQ14507 147 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 PDCD1Q15116 288 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 KRBOX4Q5JUW0 171 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 NKAPLQ5M9Q1 402 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 DCAF12L2Q5VW00 463 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 CLEC9AQ6UXN8 241 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 C17orf107Q6ZR85 190 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 FAM185AQ8N0U4 392 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 FAM89BQ8N5H3 189 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 SUMF2Q8NBJ7 301 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 OR4S1Q8NGB4 309 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 NDNFQ8TB73 568 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 LGALS14Q8TCE9 139 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 DGCR14Q96DF8 476 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 S100A16Q96FQ6 103 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 CMTM3Q96MX0 182 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 NUDT16L1Q9BRJ7 211 aaKnown RBP6.33□□□□□ -1.4
TDP1-214ENST00000556063 DCTN5Q9BTE1 182 aa6.33□□□□□ -1.4
TDP1-214ENST00000556063 CHST6Q9GZX3 395 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms