RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CYTIPO60759 359 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 MRPL33O75394 65 aaKnown RBP6.04□□□□□ -1.44
TDP1-213ENST00000555880 IFNA4P05014 189 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 CRYBA1P05813 215 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 GLI4P10075 376 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SPP1P10451 314 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 S100GP29377 79 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 NTF4P34130 210 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SNCAP37840 140 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 TSPAN7P41732 249 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 ID4P47928 161 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 CLDN15P56746 228 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 VAMP2P63027 116 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 ZNF266Q14584 549 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 GUK1Q16774 197 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SPIN3Q5JUX0 258 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 PPP1R32Q7Z5V6 425 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 ZNF695Q8IW36 515 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SLC35G3Q8N808 338 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 OR11L1Q8NGX0 322 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 NEK7Q8TDX7 302 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SECTM1Q8WVN6 248 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 EXTL1Q92935 676 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SPSB4Q96A44 273 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 TMEM45BQ96B21 275 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 MSI2Q96DH6 328 aaKnown RBP6.04□□□□□ -1.44
TDP1-213ENST00000555880 C14orf79Q96F83 325 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 C1QTNF5Q9BXJ0 243 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SLC25A31Q9H0C2 315 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 TMEM222Q9H0R3 208 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 B4GALT7Q9UBV7 327 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 CACFD1Q9UGQ2 172 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 TCFL5Q9UL49 500 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 RCL1Q9Y2P8 373 aaKnown RBP6.04□□□□□ -1.44
TDP1-213ENST00000555880 NOSIPQ9Y314 301 aaKnown RBP6.04□□□□□ -1.44
TDP1-213ENST00000555880 SHANK1Q9Y566 2161 aa6.04□□□□□ -1.44
TDP1-213ENST00000555880 SPEGQ15772 3267 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 PIGBOS1A0A0B4J2F0 54 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 KIR2DS1A0A191URI9 304 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 PQLC2LA1A4F0 135 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 ZNF587BE7ETH6 402 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 RPL36A-HNRNPH2H7BZ11 118 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 M0R296 226 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 MASP2O00187 686 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 SERPINA7P05543 415 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 RFPL3SP0C7P2 107 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 EDN3P14138 238 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 FOLR2P14207 255 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 KIR2DS4P43632 304 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 KIR2DS1Q14954 304 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
TDP1-213ENST00000555880 PEAR1Q5VY43 1037 aaPredicted RBP6.03□□□□□ -1.44
TDP1-213ENST00000555880 C6orf15Q6UXA7 325 aaPredicted RBP6.03□□□□□ -1.44
TDP1-213ENST00000555880 CLEC9AQ6UXN8 241 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 Q6ZS49 121 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.03□□□□□ -1.44
TDP1-213ENST00000555880 MRPL21Q7Z2W9 205 aaKnown RBP6.03□□□□□ -1.44
TDP1-213ENST00000555880 SAXO1Q8IYX7 474 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 HSD17B11Q8NBQ5 300 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 OR52M1Q8NGK5 317 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 ABHD3Q8WU67 409 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 BOD1Q96IK1 185 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 ABHD14BQ96IU4 210 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 ADGRG7Q96K78 797 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 HIST1H2AAQ96QV6 131 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 TP53RKQ96S44 253 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 SPACA1Q9HBV2 294 aa6.03□□□□□ -1.44
TDP1-213ENST00000555880 DUXBA0A1W2PPF3 345 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 ZNF98A6NK75 572 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 TRDCB7Z8K6 153 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 UMAD1C9J7I0 102 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 FAM157AC9JC47 383 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 TRAPPC2LH3BP13 241 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 HSPA12AO43301 675 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SYNGR4O95473 234 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 IGHV3-9P01782 118 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 MT-ND4LP03901 98 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 S100A6P06703 90 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 MMP7P09237 267 aaPredicted RBP6.02□□□□□ -1.44
TDP1-213ENST00000555880 CTXN2P0C2S0 81 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 ZNF44P15621 663 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 CCNOP22674 350 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 PTAFRP25105 342 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 NKX2-1P43699 371 aaPredicted RBP6.02□□□□□ -1.44
TDP1-213ENST00000555880 UCP2P55851 309 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 RPS18P62269 152 aaKnown RBP6.02□□□□□ -1.44
TDP1-213ENST00000555880 EWSR1Q01844 656 aaKnown RBP eCLIP6.02□□□□□ -1.44
TDP1-213ENST00000555880 NHLH2Q02577 135 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 FOXO1Q12778 655 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 PRDX4Q13162 271 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SSPNQ14714 243 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 PDCD1Q15116 288 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 RHEBQ15382 184 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 IGSF11Q5DX21 431 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SHEQ5VZ18 495 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.44
TDP1-213ENST00000555880 TMEM182Q6ZP80 229 aaPredicted RBP6.02□□□□□ -1.44
TDP1-213ENST00000555880 TBC1D26Q86UD7 250 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms