RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CRYBA1P05813 215 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 CELP19835 753 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 FSTP19883 344 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 BDKRB2P30411 391 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 PTGFRP43088 359 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 GLIPR1P48060 266 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 AESQ08117 197 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 ATXN7L3Q14CW9 347 aaPredicted RBP16.65■□□□□ 0.26
VTI1B-205ENST00000555543 ASCL4Q6XD76 172 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 CHST4Q8NCG5 386 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 COQ2Q96H96 371 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 NR1H4Q96RI1 486 aaPredicted RBP16.65■□□□□ 0.26
VTI1B-205ENST00000555543 ERGIC3Q9Y282 383 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 A0A1W2PPK0 400 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 PTGES3LE9PB15 166 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 DEGS1O15121 323 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 GPX5O75715 221 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 MMP23AO75900 390 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 MYF6P23409 242 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 ZNF93P35789 620 aaPredicted RBP16.64■□□□□ 0.25
VTI1B-205ENST00000555543 RPL15P61313 204 aaKnown RBP16.64■□□□□ 0.25
VTI1B-205ENST00000555543 RSU1Q15404 277 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 PIGYQ3MUY2 71 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 LDLRAD2Q5SZI1 272 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 RNLSQ5VYX0 342 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 TRAPPC6BQ86SZ2 158 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 DYNAPQ8N1N2 210 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 Q8NFD4 153 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 OR51T1Q8NGJ9 327 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 OR5M11Q96RB7 305 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 ZNF184Q99676 751 aaPredicted RBP16.64■□□□□ 0.25
VTI1B-205ENST00000555543 ING3Q9NXR8 418 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 ZNF581Q9P0T4 197 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 LSM2Q9Y333 95 aaKnown RBP16.64■□□□□ 0.25
VTI1B-205ENST00000555543 MMP24Q9Y5R2 645 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 TRRAPQ9Y4A5 3859 aa16.64■□□□□ 0.25
VTI1B-205ENST00000555543 TRAV24A0A0B4J272 114 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 BTBD17A6NE02 478 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 FAM90A8PA6NJQ4 464 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 H3BUX3 64 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 HSPB6O14558 160 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 PIN1P1O15428 100 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 CLPXO76031 633 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 CSN2P05814 226 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 ZNF626Q68DY1 528 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 OR13D1Q8NGV5 346 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 OR4F5Q8NH21 305 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 OR5R1Q8NH85 324 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 DERL3Q96Q80 235 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 SSX3Q99909 188 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 CDCA4Q9BXL8 241 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 ANKRD60Q9BZ19 345 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 MEGF9Q9H1U4 602 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 PPIL3Q9H2H8 161 aaKnown RBP16.63■□□□□ 0.25
VTI1B-205ENST00000555543 IL36GQ9NZH8 169 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 UBE2J1Q9Y385 318 aaPredicted RBP16.63■□□□□ 0.25
VTI1B-205ENST00000555543 SESN1Q9Y6P5 492 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 PKD1L1Q8TDX9 2849 aa16.63■□□□□ 0.25
VTI1B-205ENST00000555543 ODAMA1E959 279 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 HTR3BO95264 441 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 ARG1P05089 322 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 CD1AP06126 327 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 LGALS4P56470 323 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 SLC35A2P78381 396 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 BDH1Q02338 343 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 IL13RA2Q14627 380 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 INSL4Q14641 139 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 LRRC75BQ2VPJ9 315 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 PRAMEF5Q5TYX0 476 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 IZUMO2Q6UXV1 221 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 BAIAP2L2Q6UXY1 529 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 GDPGP1Q6ZNW5 385 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 OR11H6Q8NGC7 330 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 MYDGFQ969H8 173 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 MND1Q9BWT6 205 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 CKLFQ9UBR5 152 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 ING4Q9UNL4 249 aa16.62■□□□□ 0.25
VTI1B-205ENST00000555543 TRGV10A0A0A0MS01 117 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 TGFBR2P37173 567 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 GDNFP39905 211 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 IRF3Q14653 427 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 PAN3Q58A45 887 aaKnown RBP16.61■□□□□ 0.25
VTI1B-205ENST00000555543 KRBOX4Q5JUW0 171 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 SHISA2Q6UWI4 295 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 CORO2AQ92828 525 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 METTL9Q9H1A3 318 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 TMEM133Q9H2Q1 129 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 BEX1Q9HBH7 125 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 SCN3BQ9NY72 215 aa16.61■□□□□ 0.25
VTI1B-205ENST00000555543 KIAA2026Q5HYC2 2103 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 IGHV2-26A0A0B4J1V2 119 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 A0A1W2PP11 408 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 FUOMA2VDF0 154 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 SERPINA2P20848 420 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 RBM11P57052 281 aaKnown RBP16.6■□□□□ 0.25
VTI1B-205ENST00000555543 DYNC1I2Q13409 638 aaKnown RBP16.6■□□□□ 0.25
VTI1B-205ENST00000555543 LY6EQ16553 131 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 PLA1AQ53H76 456 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 OLFML2AQ68BL7 652 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms