RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 MCRIP1C9JLW8 97 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 CTDSP2O14595 271 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 PDCD6O75340 191 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 FCN3O75636 299 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 SCGNO76038 276 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 ECDO95905 644 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L2P0CJ85 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L3P0CJ86 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L4P0CJ87 422 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L5P0CJ88 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L6P0CJ89 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L7P0CJ90 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 ERP29P30040 261 aaKnown RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 VEGFCP49767 419 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 RBM39Q14498 530 aaKnown RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 UBE2NLQ5JXB2 153 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 CD276Q5ZPR3 534 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 WDR25Q64LD2 544 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 BRICD5Q6PL45 260 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4L9Q6RFH8 374 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 METAP1DQ6UB28 335 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 CMTM4Q8IZR5 234 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 OR8H2Q8N162 312 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 BPIFB2Q8N4F0 458 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 OR4S1Q8NGB4 309 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 OR10R2Q8NGX6 335 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 MCFD2Q8NI22 146 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 SLC25A38Q96DW6 304 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 NUDT16L1Q9BRJ7 211 aaKnown RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DPCDQ9BVM2 203 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DIABLOQ9NR28 239 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 PLEKHJ1Q9NW61 149 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 RHBDL2Q9NX52 303 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 ZNF581Q9P0T4 197 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 DUX4Q9UBX2 424 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 SLC25A10Q9UBX3 287 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 CLN8Q9UBY8 286 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 CHD3Q12873 2000 aaKnown RBP8.47□□□□□ -1.05
SYNE2-215ENST00000554997 OTOGQ6ZRI0 2925 aa8.47□□□□□ -1.05
SYNE2-215ENST00000554997 MGST3O14880 152 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 HPGDSO60760 199 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 FOXH1O75593 365 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 APOA1P02647 267 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 CSN2P05814 226 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ELK1P19419 428 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ZFP36P26651 326 aaKnown RBP8.46□□□□□ -1.06
SYNE2-215ENST00000554997 CHATP28329 748 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 IL2RGP31785 369 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 OR3A1P47881 315 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 KCNJ3P48549 501 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 GNB2P62879 340 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 PAX5Q02548 391 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ARL6IP1Q15041 203 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 GRK1Q15835 563 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 CNPY1Q3B7I2 92 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 MOGAT2Q3SYC2 334 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ESCO2Q56NI9 601 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 PAN3Q58A45 887 aaKnown RBP8.46□□□□□ -1.06
SYNE2-215ENST00000554997 PLAC9Q5JTB6 97 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 SPNS3Q6ZMD2 512 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 C6orf201Q7Z4U5 140 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ASCC1Q8N9N2 400 aaKnown RBP8.46□□□□□ -1.06
SYNE2-215ENST00000554997 TMEM185AQ8NFB2 350 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 PHF21AQ96BD5 680 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 RAB3CQ96E17 227 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 DMRTB1Q96MA1 342 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 FAAP24Q9BTP7 215 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-215ENST00000554997 NCOR1P1Q9H4R4 102 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 ARID1AO14497 2285 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 TANC2Q9HCD6 1990 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 CELSR1Q9NYQ6 3014 aa8.46□□□□□ -1.06
SYNE2-215ENST00000554997 LOC105371242A0A075B767 164 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 FUOMA2VDF0 154 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 B4DSR2 109 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 FAM157AC9JC47 383 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 RGS5O15539 181 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 XRCC3O43542 346 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 CA11O75493 328 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 TPPPO94811 219 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 SELLP14151 372 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 NDUFB7P17568 137 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 SEC61A1P61619 476 aaKnown RBP8.45□□□□□ -1.06
SYNE2-215ENST00000554997 AESQ08117 197 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 CDNFQ49AH0 187 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 SLC35E4Q6ICL7 350 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 BTN2A1Q7KYR7 527 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 GDPD3Q7L5L3 318 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-215ENST00000554997 ST8SIA4Q92187 359 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 ARHGAP5-AS1Q96IT6 56 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 DCTN5Q9BTE1 182 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 PECRQ9BY49 303 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 C6orf62Q9GZU0 229 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-215ENST00000554997 CHST6Q9GZX3 395 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 PPA2Q9H2U2 334 aa8.45□□□□□ -1.06
SYNE2-215ENST00000554997 MIXL1Q9H2W2 232 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms