RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 Q96M66 194 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 WFDC1Q9HC57 220 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 CCL28Q9NRJ3 127 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 RNF150Q9ULK6 438 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 USF3Q68DE3 2245 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 ZNF587BE7ETH6 402 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 TRAPPC2LH3BP13 241 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 FGF16O43320 207 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 ZIC3O60481 467 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 OR2C1O95371 312 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 PRF1P14222 555 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 LSM6P62312 80 aaKnown RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 CXorf67Q86X51 503 aaPredicted RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 THOC3Q96J01 351 aaKnown RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 MED13LQ71F56 2210 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 A0A1W2PPE3 182 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 H7C1Q1 480 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 TAAR5O14804 337 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 SELEP16581 610 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 PTAFRP25105 342 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 SULT1A2P50226 295 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 SUCLG1P53597 346 aaKnown RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 FOXG1P55316 489 aaPredicted RBP10.28□□□□□ -0.76
XRCC3-208ENST00000554811 TBC1D26Q86UD7 250 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 LYPD6Q86Y78 171 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 OR1K1Q8NGR3 316 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 HLA-CQ95604 372 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 TGIF2Q9GZN2 237 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
XRCC3-208ENST00000554811 LRP4O75096 1905 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 F8VVB4 439 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 F8VWA3 439 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 CBR3O75828 277 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 VAMP5O95183 116 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 PPYP01298 95 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 G0S2P27469 103 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 NTF4P34130 210 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 RAB11AP62491 216 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 OR8G2PQ6IF36 304 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 LRFN1Q9P244 771 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 DNAJB11Q9UBS4 358 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 TIMM10BQ9Y5J6 103 aa10.27□□□□□ -0.76
XRCC3-208ENST00000554811 ABCA1O95477 2261 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 SIRPB1O00241 398 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 SOX15O60248 233 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 CELA3AP09093 270 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 HLA-GP17693 338 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 NAAAQ02083 359 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 KIAA0141Q14154 515 aaPredicted RBP10.27□□□□□ -0.77
XRCC3-208ENST00000554811 RAB35Q15286 201 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 RSPO1Q2MKA7 263 aaPredicted RBP10.27□□□□□ -0.77
XRCC3-208ENST00000554811 ZNF343Q6P1L6 599 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 NECAP1Q8NC96 275 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 ADPRHL1Q8NDY3 354 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 PSMF1Q92530 271 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 MSTNO14793 375 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 PDCD6O75340 191 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 TUSC2O75896 110 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 YIF1AO95070 293 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 NGFP01138 241 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 CHATP28329 748 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 CYB561P49447 251 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 B2MP61769 119 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 RAC1P63000 192 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 MKXQ8IYA7 352 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 OR2C3Q8N628 320 aa10.27□□□□□ -0.77
XRCC3-208ENST00000554811 GJE1A6NN92 205 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 FUT3P21217 361 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 RPL23AP62750 156 aaKnown RBP10.26□□□□□ -0.77
XRCC3-208ENST00000554811 CCL20P78556 96 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.77
XRCC3-208ENST00000554811 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 HIST2H3AQ71DI3 136 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 CMTM1Q8IZ96 169 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 SAT2Q96F10 170 aaPredicted RBP10.26□□□□□ -0.77
XRCC3-208ENST00000554811 PLEKHA2Q9HB19 425 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 GHRLQ9UBU3 117 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 H0YL77 283 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 UMODP07911 640 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 SULT1A1P50225 295 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 DYNLT3P51808 116 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 TESK1Q15569 626 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 STX12Q86Y82 276 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 ZNF808Q8N4W9 903 aaPredicted RBP10.26□□□□□ -0.77
XRCC3-208ENST00000554811 CPT1CQ8TCG5 803 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 SPSB1Q96BD6 273 aa10.26□□□□□ -0.77
XRCC3-208ENST00000554811 TMEM38BQ9NVV0 291 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms