RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 FAM106CPP0CH98 169 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 LMO1P25800 156 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 KIR3DL2P43630 455 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 TMEM244Q5VVB8 128 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 KDM4DQ6B0I6 523 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 SPSB1Q96BD6 273 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 FGGYQ96C11 551 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 OPALINQ96PE5 141 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 MCRIP2Q9BUT9 160 aaKnown RBP9.91□□□□□ -0.82
RDH11-207ENST00000554731 PCDHB16Q9NRJ7 776 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 MOB4Q9Y3A3 225 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
RDH11-207ENST00000554731 A0A087X0M5 115 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 A0A1B0GX30 115 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ZNF729A6NN14 1252 aaPredicted RBP9.9□□□□□ -0.82
RDH11-207ENST00000554731 KDM4BO94953 1096 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 CSN2P05814 226 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ZNF44P15621 663 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 RPL23AP62750 156 aaKnown RBP9.9□□□□□ -0.82
RDH11-207ENST00000554731 SCN1BQ07699 218 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ATP6AP1Q15904 470 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 TP53I3Q53FA7 332 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 KRBOX4Q5JUW0 171 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ETV3LQ6ZN32 361 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ZNF329Q86UD4 541 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 THNSL2Q86YJ6 484 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ZDHHC13Q8IUH4 622 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 CHST4Q8NCG5 386 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 OR2G2Q8NGZ5 317 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 TOMM40LQ969M1 308 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 RFT1Q96AA3 541 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 RPEQ96AT9 228 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 COMMD4Q9H0A8 199 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ING3Q9NXR8 418 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 OR6C3Q9NZP0 311 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 ZMAT5Q9UDW3 170 aaKnown RBP9.9□□□□□ -0.82
RDH11-207ENST00000554731 AMMECR1Q9Y4X0 333 aaPredicted RBP9.9□□□□□ -0.82
RDH11-207ENST00000554731 COL7A1Q02388 2944 aa9.9□□□□□ -0.82
RDH11-207ENST00000554731 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.83
RDH11-207ENST00000554731 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 CCDC159P0C7I6 412 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 NFYBP25208 207 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 SLC6A1P30531 599 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 THBS3P49746 956 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 ISL1P61371 349 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 TMED1Q13445 227 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 UNQ9370/PRO34162Q6UXP9 181 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 OR2W3Q7Z3T1 314 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 OR8J1Q8NGP2 316 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 OR9G1Q8NH87 305 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 CHPT1Q8WUD6 406 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 RFKQ969G6 155 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 COQ2Q96H96 371 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 SPACA5Q96QH8 159 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 MBOAT4Q96T53 435 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 RHOFQ9HBH0 211 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
RDH11-207ENST00000554731 KBTBD11-OT1A0A1B0GTJ5 212 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A18PA6NE21 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A16PA6NEW6 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A20PA6NIJ5 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A9PA6NNJ1 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A12PA8MX19 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A5PA8MXJ8 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 SLC33A1O00400 549 aaPredicted RBP9.88□□□□□ -0.83
RDH11-207ENST00000554731 DEGS1O15121 323 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 ISG15P05161 165 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A15PP0C7V4 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A13PP0C7W8 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A14PP0C7W9 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FAM90A24PP0C7X0 464 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 MYCNOSP40205 109 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 ZNF85Q03923 595 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 BNIP1Q12981 228 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 HES1Q14469 280 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 ATXN7L3Q14CW9 347 aaPredicted RBP9.88□□□□□ -0.83
RDH11-207ENST00000554731 C17orf58Q2M2W7 97 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 Q6P435 159 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 KCTD20Q7Z5Y7 419 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 SAXO1Q8IYX7 474 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 OR5D18Q8NGL1 313 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 OR13C9Q8NGT0 318 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 OR56B4Q8NH76 319 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
RDH11-207ENST00000554731 EME1Q96AY2 570 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 KIRREL1Q96J84 757 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 NOL4LQ96MY1 436 aaPredicted RBP9.88□□□□□ -0.83
RDH11-207ENST00000554731 CIB1Q99828 191 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 GABARAPL1Q9H0R8 117 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 ZFP57Q9NU63 452 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 FRRS1LQ9P0K9 344 aa9.88□□□□□ -0.83
RDH11-207ENST00000554731 SERPINE3A8MV23 424 aa9.87□□□□□ -0.83
RDH11-207ENST00000554731 J3QR06 171 aa9.87□□□□□ -0.83
RDH11-207ENST00000554731 MT-ND2P03891 347 aa9.87□□□□□ -0.83
RDH11-207ENST00000554731 TMEM11P17152 192 aa9.87□□□□□ -0.83
RDH11-207ENST00000554731 FASP25445 335 aa9.87□□□□□ -0.83
RDH11-207ENST00000554731 POLR2IP36954 125 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms