RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CDRT4Q8N9R6 151 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 CLEC1AQ8NC01 280 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 CHST4Q8NCG5 386 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 OR4D11Q8NGI4 311 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 OR9G4Q8NGQ1 327 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 OR1J1Q8NGS3 322 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 OR56B4Q8NH76 319 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF519Q8TB69 540 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 HIST1H2BHQ93079 126 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 IGSF8Q969P0 613 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM106AQ96A25 262 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TM4SF19Q96DZ7 209 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 ZBTB45Q96K62 511 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-227ENST00000554491 VSTM2LQ96N03 204 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 ZFP3Q96NJ6 502 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 GPR82Q96P67 336 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 SIGLEC12Q96PQ1 595 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 LYSMD1Q96S90 227 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 MBOAT4Q96T53 435 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 DDOQ99489 341 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TBX5Q99593 518 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 HIST1H2BNQ99877 126 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 HIST1H2BMQ99879 126 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF649Q9BS31 505 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TAPBPLQ9BX59 468 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 SLC25A51Q9H1U9 297 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 Q9N2K0 584 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM100Q9NV29 134 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 CLN8Q9UBY8 286 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 MARCOQ9UEW3 520 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-227ENST00000554491 CACFD1Q9UGQ2 172 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 TNFSF18Q9UNG2 199 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 PIGLQ9Y2B2 252 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 WDR45Q9Y484 360 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 YIPF1Q9Y548 306 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 INSL5Q9Y5Q6 135 aa3.8□□□□□ -1.8
ATXN3-227ENST00000554491 SETD2Q9BYW2 2564 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 MYO18AQ92614 2054 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LOC105369274A0A096LPK9 316 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 A0A0J9YY10 115 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 C13orf42A0A1B0GVH6 325 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 A0A1B0GX78 115 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SMIM9A6NGZ8 99 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 NPIPB13A6NJU9 1138 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 BBIP1A8MTZ0 92 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SNRPGP15A8MWD9 76 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 IDSB3KWA1 339 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 NPIPB4C9JG80 1138 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 KIR2DS3K7RE56 304 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TNFRSF13BO14836 293 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SPRY1O43609 319 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 FOXH1O75593 365 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CD74P04233 296 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 IL5P05113 134 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR4Q2P0C623 313 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SLC35G6P0C7Q6 338 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF883P0CG24 379 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ACP2P11117 423 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LIPCP11150 499 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 IDSP22304 550 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PNPLA4P41247 253 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 GPR6P46095 362 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR3A2P47893 321 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CAV2P51636 162 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 RAB38P57729 211 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SLC35A1P78382 337 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LCN2P80188 198 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PPP1R8Q12972 351 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PRDX4Q13162 271 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PDE7AQ13946 482 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 EIF2B1Q14232 305 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF345Q14585 488 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 GNMTQ14749 295 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 MEF2DQ14814 521 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 KIR2DS3Q14952 304 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 GABRA6Q16445 453 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF750Q32MQ0 723 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SPANXN3Q5MJ09 141 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TIMM23BQ5SRD1 257 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF57Q68EA5 555 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 HIST2H2BCQ6DN03 193 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TXNRD3NBQ6F5E7 133 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PODNL1Q6PEZ8 512 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 COX15Q7KZN9 410 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 RNF44Q7L0R7 432 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ERASQ7Z444 233 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TMPRSS12Q86WS5 348 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 KLHDC8AQ8IYD2 350 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LAS2Q8IYD9 372 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR4N4Q8N0Y3 316 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 BCORP1Q8N888 145 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 BMPERQ8N8U9 685 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ACOT4Q8N9L9 421 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 FER1L6-AS1Q8NA97 138 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR4K2Q8NGD2 314 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR4K1Q8NGD4 311 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms