RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF608Q9ULD9 1512 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF532Q9HCE3 1301 aa3.17□□□□□ -1.9
SCFD1-211ENST00000554437 TGIF2-C20orf24A0A0A6YYL0 155 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 CENPVL3A0A0U1RRI6 287 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 MFNGO00587 321 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 PSPHP1O15172 72 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 TNFSF13O75888 250 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 CNIH1O95406 144 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 TRBV12-3P01733 135 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 BGLAPP02818 100 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 MT-ND4P03905 459 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 SPNP16150 400 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 TAC1P20366 129 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 SSTR5P35346 364 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 APLNRP35414 380 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 LHX2P50458 406 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 ERFP50548 548 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 IFITM3Q01628 133 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 KRR1Q13601 381 aaKnown RBP3.16□□□□□ -1.9
SCFD1-211ENST00000554437 PMVKQ15126 192 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 LRRC75BQ2VPJ9 315 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 TMEM255AQ5JRV8 349 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 KDM4DQ6B0I6 523 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 IGFL3Q6UXB1 125 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 FBXW12Q6X9E4 464 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 ACP7Q6ZNF0 438 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 DGAT2L6Q6ZPD8 337 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 OR6V1Q8N148 313 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 RXFP4Q8TDU9 374 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 SLC37A2Q8TED4 501 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 OR10C1Q96KK4 312 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 OR2M2Q96R28 347 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 PHB2Q99623 299 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 NIPSNAP1Q9BPW8 284 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 PECRQ9BY49 303 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 PARP12Q9H0J9 701 aaKnown RBP3.16□□□□□ -1.9
SCFD1-211ENST00000554437 OR51E2Q9H255 320 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 VSIRQ9H7M9 311 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 XPNPEP1Q9NQW7 623 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 RBFOX1Q9NWB1 397 aaKnown RBP3.16□□□□□ -1.9
SCFD1-211ENST00000554437 GLTPQ9NZD2 209 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 VPS29Q9UBQ0 182 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 NUFIP1Q9UHK0 495 aaKnown RBP3.16□□□□□ -1.9
SCFD1-211ENST00000554437 FBXO5Q9UKT4 447 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 HEBP2Q9Y5Z4 205 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 ADAMTSL3P82987 1691 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 ARHGAP21Q5T5U3 1957 aa3.16□□□□□ -1.9
SCFD1-211ENST00000554437 A0A1W2PP64 1363 aa3.15□□□□□ -1.9
SCFD1-211ENST00000554437 PALLDQ8WX93 1383 aa3.15□□□□□ -1.9
SCFD1-211ENST00000554437 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 GNG14A0A1W2PPG7 69 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 NKX2-6A6NCS4 301 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 SMIM9A6NGZ8 99 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 CLDN24A6NM45 220 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 UPK2O00526 184 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 FOXH1O75593 365 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 CNMDO75829 334 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 DHRS3O75911 302 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 TDGF1P13385 188 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ZNF30P17039 623 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 CFL1P23528 166 aaKnown RBP3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ADORA1P30542 326 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 CCR7P32248 378 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 TDGF1P3P51864 188 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 SLC18A1P54219 525 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 KRTAP10-8P60410 259 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 HERVK_113P61574 105 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 RPL19P84098 196 aaKnown RBP3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ZNF235Q14590 738 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 RBMY1FQ15415 496 aaKnown RBP3.15□□□□□ -1.91
SCFD1-211ENST00000554437 C6orf99Q4VX62 202 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 FAM162BQ5T6X4 162 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 C1orf195Q5TG92 126 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 DNAJC24Q6P3W2 148 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ARL9Q6T311 187 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ZCCHC24Q8N2G6 241 aaKnown RBP3.15□□□□□ -1.91
SCFD1-211ENST00000554437 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 OR2D3Q8NGH3 330 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 OR10G6Q8NH81 332 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 PYDC1Q8WXC3 89 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 ASB17Q8WXJ9 295 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 LRRC58Q96CX6 371 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 STARD4Q96DR4 205 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 SMIM8Q96KF7 97 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 TIPINQ9BVW5 301 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 SPNS1Q9H2V7 528 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 TRABDQ9H4I3 376 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 TRAPPC4Q9Y296 219 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 NFASCO94856 1347 aa3.15□□□□□ -1.91
SCFD1-211ENST00000554437 FHAD1B1AJZ9 1412 aa3.14□□□□□ -1.91
SCFD1-211ENST00000554437 NPHP4O75161 1426 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-211ENST00000554437 IGKV1-8A0A0C4DH67 115 aa3.14□□□□□ -1.91
SCFD1-211ENST00000554437 A0A0U1RQV1 116 aa3.14□□□□□ -1.91
SCFD1-211ENST00000554437 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-211ENST00000554437 SPAG7O75391 227 aa3.14□□□□□ -1.91
SCFD1-211ENST00000554437 IFNA14P01570 189 aa3.14□□□□□ -1.91
SCFD1-211ENST00000554437 CD5P06127 495 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms