RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PRDX2P32119 198 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 GUCA1AP43080 201 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 GLIPR1P48060 266 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 GPM6AP51674 278 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RPS6KA3P51812 740 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 SLC7A2P52569 658 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RPL23AP62750 156 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RPL31P62899 125 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 SLC35A2P78381 396 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 MFGE8Q08431 387 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ARL16Q0P5N6 197 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ECH1Q13011 328 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 EIF2B1Q14232 305 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 KCNJ8Q15842 424 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 C17orf58Q2M2W7 97 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 KIAA2026Q5HYC2 2103 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FGD3Q5JSP0 725 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TEX30Q5JUR7 227 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 AGBL2Q5U5Z8 902 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 NCR3LG1Q68D85 454 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 HAGHLQ6PII5 290 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 PLEKHG7Q6ZR37 379 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TRPM8Q7Z2W7 1104 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 OR2W3Q7Z3T1 314 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 C5orf24Q7Z6I8 188 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM179BQ7Z7N9 219 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ADCK1Q86TW2 530 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 HAPLN4Q86UW8 402 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ANGPTL5Q86XS5 388 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 KIRREL3Q8IZU9 778 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RNF148Q8N7C7 305 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 SPERTQ8NA61 448 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 POC1AQ8NBT0 407 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 BBS1Q8NFJ9 593 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 OR8S1Q8NH09 359 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM163Q8TC26 289 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FANK1Q8TC84 345 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RASSF5Q8WWW0 418 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RNF170Q96K19 258 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RCHY1Q96PM5 261 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 NIPSNAP1Q9BPW8 284 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 NABP2Q9BQ15 211 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 COPS4Q9BT78 406 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 IFT27Q9BW83 186 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 CHID1Q9BWS9 393 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 PAPOLGQ9BWT3 736 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TTTY10Q9BZA0 68 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 WDR12Q9GZL7 423 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 SLC22A4Q9H015 551 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 DNTTIP1Q9H147 329 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 CCDC134Q9H6E4 229 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF286AQ9HBT8 521 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 DCAF13Q9NV06 445 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM206AQ9NX38 181 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 MTCH1Q9NZJ7 389 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF581Q9P0T4 197 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ABCD2Q9UBJ2 740 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 CAB39Q9Y376 341 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 RYR1P21817 5038 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SAA2-SAA4A0A096LPE2 208 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 IGHV2-26A0A0B4J1V2 119 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 IGKV1-12A0A0C4DH73 117 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 A0A0G2JND7 137 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1W2PPI3 338 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 PQLC2LA1A4F0 135 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 HTR3EA5X5Y0 456 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CCDC182A6NF36 153 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ANKRD30BLA7E2S9 258 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF736B4DX44 427 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF878C9JN71 531 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 K7N7A8 449 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TNFRSF6BO95407 300 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SOX14O95416 240 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 RENP00797 406 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 IGKV1D-12P01611 117 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 IGHV3-7P01780 117 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TTRP02766 147 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 HCKP08631 526 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF728P0DKX0 622 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CGB3P0DN86 165 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CGB7P0DN87 165 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SLC2A5P22732 501 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CHATP28329 748 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 RRM2P31350 389 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SLC6A6P31641 620 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 DDOSTP39656 456 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 NPBWR2P48146 333 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CRIP2P52943 208 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ACTA2P62736 377 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ACTG2P63267 376 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ACTC1P68032 377 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 ACTA1P68133 377 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SPIBQ01892 262 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 SLC34A1Q06495 639 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TSPAN31Q12999 210 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 CYLC2Q14093 348 aaPredicted RBP2.42□□□□□ -2.02
SLIRP-202ENST00000553981 UBE2V2Q15819 145 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 TIGD6Q17RP2 521 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 COQ5Q5HYK3 327 aa2.42□□□□□ -2.02
SLIRP-202ENST00000553981 PRAMEF5Q5TYX0 476 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms