RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 GPR132Q9UNW8 380 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 POLEQ07864 2286 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 A8MXE2 369 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CA11O75493 328 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CD34P28906 385 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CEBPDP49716 269 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 IL13RA1P78552 427 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 SLC9A3R2Q15599 337 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 MPPED2Q15777 294 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 ACTBL2Q562R1 376 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 KCTD9Q7L273 389 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 LYG2Q86SG7 212 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 SAXO1Q8IYX7 474 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM58AQ8N1B3 248 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 NEK7Q8TDX7 302 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 SFXN3Q9BWM7 321 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 WDR13Q9H1Z4 485 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 CHMP1AQ9HD42 196 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 ZFP57Q9NU63 452 aa10.83□□□□□ -0.68
VIPAS39-206ENST00000553888 TRAV39A0A0B4J263 110 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 VSTM5A8MXK1 200 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 J3QT63 122 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 WNT9BO14905 357 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 ATXN7O15265 892 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 IL24Q13007 206 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 COTL1Q14019 142 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 ARL6IP1Q15041 203 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 ZMYND11Q15326 602 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 PXDC1Q5TGL8 231 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 C20orf204Q6ZNR8 217 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM219AQ8IW50 185 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 SEC22AQ96IW7 307 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 UFSP2Q9NUQ7 469 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 SLC23A1Q9UHI7 598 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 J3QW42 95 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 OR2A4O95047 310 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 KNG1P01042 644 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 OR5H8P0DN80 308 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 FXYD4P59646 89 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 LGALSLQ3ZCW2 172 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 SUMF2Q8NBJ7 301 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 RELL2Q8NC24 303 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 OR2A7Q96R45 310 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 RANBP3Q9H6Z4 567 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 PCDHB16Q9NRJ7 776 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 OPN4Q9UHM6 478 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 DUSP13Q9UII6 198 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 AMDHD2Q9Y303 409 aa10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 TPRP12270 2363 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-206ENST00000553888 TRAV24A0A0B4J272 114 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 CLN5O75503 358 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 GIPP09681 153 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SPRNQ5BIV9 151 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 KRBOX4Q5JUW0 171 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 TIMM23BQ5SRD1 257 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF660Q6AZW8 331 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 OR8G5Q8NG78 346 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 TOMM40LQ969M1 308 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM100Q9NV29 134 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 ITPR1Q14643 2758 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 PGAM2P15259 253 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 NFYAP23511 347 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SNTB1Q13884 538 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 ODF1Q14990 250 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 FAM76BQ5HYJ3 339 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 OR10Z1Q8NGY1 313 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 MYOZ1Q9NP98 299 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 LRP5LA4QPB2 252 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 J3KRW8 73 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SIRPB1O00241 398 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SHOXO15266 292 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF44P15621 663 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 DTYMKP23919 212 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 FPR2P25090 351 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 PEG10Q86TG7 708 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 C11orf53Q8IXP5 236 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 SYT3Q9BQG1 590 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 PKIBQ9C010 78 aa10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-206ENST00000553888 DIDO1Q9BTC0 2240 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 TRIM77I1YAP6 450 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 SCTP09683 121 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 LRRC37A5PQ49AS3 106 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 A6NLC8 198 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 GCH1P30793 250 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 FCGR2CP31995 323 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 SORDQ00796 357 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 ZNF718Q3SXZ3 478 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 NHLRC3Q5JS37 347 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 CLEC18BQ6UXF7 455 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 UBALD1Q8TB05 177 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 MUCL1Q96DR8 90 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 TMEM68Q96MH6 324 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 BCL2L14Q9BZR8 327 aa10.8□□□□□ -0.68
VIPAS39-206ENST00000553888 NECAP2Q9NVZ3 263 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms