RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
SHMT2-208ENST00000553868 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 A0A1W2PQ09 198 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 PDCD6O75340 191 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 RBBP9O75884 186 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 OR7C1O76099 320 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-208ENST00000553868 ECDO95905 644 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-208ENST00000553868 IRF2P14316 349 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 FUT3P21217 361 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 CBX5P45973 191 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 PPOXP50336 477 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 ACTBP60709 375 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 ACTG1P63261 375 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 DGCR2P98153 550 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 MPPED2Q15777 294 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 RGS21Q2M5E4 152 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 PIGYQ3MUY2 71 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 SPIN3Q5JUX0 258 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 STEAP3Q658P3 488 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-208ENST00000553868 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 SGMS2Q8NHU3 365 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 CHODLQ9H9P2 273 aa12.15□□□□□ -0.46
SHMT2-208ENST00000553868 RYR3Q15413 4870 aa12.15□□□□□ -0.47
SHMT2-208ENST00000553868 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 LRRC30A6NM36 301 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-208ENST00000553868 MFNGO00587 321 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
SHMT2-208ENST00000553868 GLAP06280 429 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 GNB3P16520 340 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 GLRA1P23415 457 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 PMELP40967 661 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 MRPS15P82914 257 aaKnown RBP12.14□□□□□ -0.47
SHMT2-208ENST00000553868 IKZF1Q13422 519 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 ARFRP1Q13795 201 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 SWI5Q1ZZU3 235 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 MST1LQ2TV78 715 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 RNASE12Q5GAN4 147 aaKnown RBP12.14□□□□□ -0.47
SHMT2-208ENST00000553868 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 FAM90A1Q86YD7 464 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 TOMM5Q8N4H5 51 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 Q8TCH9 128 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 YIPF5Q969M3 257 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 TRIM63Q969Q1 353 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 ZNF488Q96MN9 340 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 PECRQ9BY49 303 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 HES4Q9HCC6 221 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 CBLN4Q9NTU7 201 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 NPTNQ9Y639 398 aa12.14□□□□□ -0.47
SHMT2-208ENST00000553868 CENPXA8MT69 81 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 H7C417 338 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 SH2D1BO14796 132 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 SSX4O60224 188 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 KNG1P01042 644 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 CSF1P09603 554 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 CD3GP09693 182 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 CHATP28329 748 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 GDNFP39905 211 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
SHMT2-208ENST00000553868 TMEM50BP56557 158 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 IFITM3Q01628 133 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 ASAH1Q13510 395 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 ATAD3CQ5T2N8 411 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 BATF2Q8N1L9 274 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 POC5Q8NA72 575 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 GPX8Q8TED1 209 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 SEH1LQ96EE3 360 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
SHMT2-208ENST00000553868 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
SHMT2-208ENST00000553868 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 RNF7Q9UBF6 113 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 MTFP1Q9UDX5 166 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 ZNF107Q9UII5 783 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-208ENST00000553868 PPP1R3CQ9UQK1 317 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 RBMX2Q9Y388 322 aaKnown RBP12.13□□□□□ -0.47
SHMT2-208ENST00000553868 CADP27708 2225 aa12.13□□□□□ -0.47
SHMT2-208ENST00000553868 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 F8VVB4 439 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 F8VWA3 439 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 DEGS1O15121 323 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 IGHV4-31P0DP07 118 aa12.12□□□□□ -0.47
SHMT2-208ENST00000553868 RCVRNP35243 200 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms