RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MALRD1Q5VYJ5 2156 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TRBV5-5A0A0J9YX44 114 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 hADV38S2A0JD32 116 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 BTBD17A6NE02 478 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 MGST3O14880 152 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 DEGS1O15121 323 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 KDM4BO94953 1096 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 PAHP00439 452 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 LALBAP00709 142 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TFF1P04155 84 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 SELLP14151 372 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 CRHBPP24387 322 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 PSMA1P25786 263 aaKnown RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 NPBWR2P48146 333 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 CEBPDP49716 269 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 ACTG1P63261 375 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 SLC35A2P78381 396 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 GPR50Q13585 617 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 EDDM3AQ14507 147 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF146Q15072 292 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 GRK1Q15835 563 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 XP32Q5T750 250 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 LAIR2Q6ISS4 152 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 PRSS48Q7RTY5 328 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 VMO1Q7Z5L0 202 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TRAPPC6BQ86SZ2 158 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 NKAIN3Q8N8D7 197 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 CHST4Q8NCG5 386 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 PXT1Q8NFP0 134 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 NR1H4Q96RI1 486 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TMED9Q9BVK6 235 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 YTHDF1Q9BYJ9 559 aaKnown RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 DUSP21Q9H596 190 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 HEXA-AS1Q9H8Q6 139 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 ZMAT3Q9HA38 289 aaKnown RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 SEBOXQ9HB31 216 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 ISYNA1Q9NPH2 558 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 SIRT7Q9NRC8 400 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 FOXJ3Q9UPW0 622 aa6.87□□□□□ -1.31
PSEN1-209ENST00000553855 SIRT4Q9Y6E7 314 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
PSEN1-209ENST00000553855 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 IGHV1-69DA0A0B4J2H0 117 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 A0A1W2PPK0 400 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 H3BUI4 141 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 K7N7A8 449 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 SIRPB1O00241 398 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 GABRPO00591 440 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 MRPS14O60783 128 aaKnown RBP6.86□□□□□ -1.31
PSEN1-209ENST00000553855 GPX5O75715 221 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 FSHBP01225 129 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 IGHV1-69P01742 117 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 MAS1P04201 325 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 SFTPBP07988 381 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 IGHV4-38-2P0DP08 117 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 CALCBP10092 127 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 DUSP1P28562 367 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 PTGFRP43088 359 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 HILS1P60008 231 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 GABARAPL2P60520 117 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 MEF2CQ06413 473 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-209ENST00000553855 ACSM3Q53FZ2 586 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 HSD17B12Q53GQ0 312 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-209ENST00000553855 GLT8D1Q68CQ7 371 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 BRD3OSQ6XYD6 125 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 C9orf139Q6ZV77 190 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 CEACAM19Q7Z692 300 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 CDH26Q8IXH8 852 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 PDZD9Q8IXQ8 264 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 OR8H2Q8N162 312 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 SIGLECL1Q8N7X8 197 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF485Q8NCK3 441 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 OR52N4Q8NGI2 321 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 OR51A2Q8NGJ7 313 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 OR13C5Q8NGS8 318 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-209ENST00000553855 PGLYRP3Q96LB9 341 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 TBX15Q96SF7 602 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 SIRPDQ9H106 197 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 NOX4Q9NPH5 578 aa6.86□□□□□ -1.31
PSEN1-209ENST00000553855 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 F8VVB4 439 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 F8VWA3 439 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 DENRO43583 198 aaKnown RBP6.85□□□□□ -1.31
PSEN1-209ENST00000553855 ARL6IP5O75915 188 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 OR2H2O95918 312 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 CRYBA1P05813 215 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 FBP1P09467 338 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 GTF2F2P13984 249 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 MMP9P14780 707 aa6.85□□□□□ -1.31
PSEN1-209ENST00000553855 PRTN3P24158 256 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms