RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	FGF16	O43320	207 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	AKR7A2	O43488	359 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	TPST1	O60507	370 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	KHDRBS3	O75525	346 aa	Known RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	SERPINA1	P01009	418 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	APOH	P02749	345 aa	Predicted RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	TSPAN19	P0C672	248 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	ZCCHC18	P0CG32	403 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	PSG2	P11465	335 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	GLRA1	P23415	457 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	CDKN2C	P42773	168 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	TCTA	P57738	103 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	HIST1H3A	P68431	136 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	PITPNA	Q00169	270 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	ZNF92	Q03936	586 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	TBCE	Q15813	527 aa	Predicted RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	SNCB	Q16143	134 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	LRIF1	Q5T3J3	769 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	HIST2H3PS2	Q5TEC6	136 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	REEP3	Q6NUK4	255 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	HIST2H3A	Q71DI3	136 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	ZNF561	Q8N587	486 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	OR10V1	Q8NGI7	309 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	ZNF596	Q8TC21	504 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	AGR3	Q8TD06	166 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	DLX4	Q92988	240 aa	Predicted RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	UBE2E2	Q96LR5	201 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	ZBTB18	Q99592	522 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	TLNRD1	Q9H1K6	362 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	OR51J1	Q9H342	316 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	RABEP2	Q9H5N1	569 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	MEPE	Q9NQ76	525 aa	Predicted RBP	4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	EMCN	Q9ULC0	261 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	VSIG4	Q9Y279	399 aa		4.41	□□□□□ -1.7
ATXN3-223	ENST00000553686	HSPG2	P98160	4391 aa		4.4	□□□□□ -1.7
ATXN3-223	ENST00000553686	IGHV2-26	A0A0B4J1V2	119 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	TMEM210	A6NLX4	147 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ANXA2P2	A6NMY6	339 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	OOSP1	A8MZH6	123 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	XRCC3	O43542	346 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SLC16A7	O60669	478 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	IGHG4	P01861	327 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	TFF1	P04155	84 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	IGF1	P05019	195 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	CHRNG	P07510	517 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR5H8	P0DN80	308 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ZNF823	P16415	610 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	VDAC1	P21796	283 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RBM34	P42696	430 aa	Known RBP	4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SLC7A2	P52569	658 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	DLX6	P56179	175 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ESRRG	P62508	458 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	TRAP1	Q12931	704 aa	Known RBP	4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	FADD	Q13158	208 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ZNF273	Q14593	569 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RGN	Q15493	299 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	AGBL2	Q5U5Z8	902 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SMARCD3	Q6STE5	483 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	NAA40	Q86UY6	237 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	FTMT	Q8N4E7	242 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	STPG4	Q8N801	248 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR56B2P	Q8NGI1	322 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR2AJ1	Q8NGZ0	328 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ZNF671	Q8TAW3	534 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RGP1	Q92546	391 aa	Predicted RBP	4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ARPC1A	Q92747	370 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	MAL2	Q969L2	176 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SPTSSA	Q969W0	71 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	ZNF426	Q9BUY5	554 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RTL8A	Q9BWD3	113 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	CLEC7A	Q9BXN2	247 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RERGL	Q9H628	205 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	YY1AP1	Q9H869	796 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	RASL12	Q9NYN1	266 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SAR1B	Q9Y6B6	198 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	SESN1	Q9Y6P5	492 aa		4.4	□□□□□ -1.71
ATXN3-223	ENST00000553686	VPS13D	Q5THJ4	4388 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	PRSS37	A4D1T9	235 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	SMIM1	B2RUZ4	78 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	LINC01619	G3V211	115 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686		M0R135	149 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	ARPC1B	O15143	372 aa	Known RBP	4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR5F1	O95221	314 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	IGLV1-51	P01701	117 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	IL6	P05231	212 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	CLEC3B	P05452	202 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	INAFM2	P0DMQ5	153 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	PRDX2	P32119	198 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	CDK6	Q00534	326 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	BDH1	Q02338	343 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	MED22	Q15528	200 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	TMEM30B	Q3MIR4	351 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	ANKDD1A	Q495B1	522 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	OR52W1	Q6IF63	320 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	WDR86	Q86TI4	376 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	RTN4RL2	Q86UN3	420 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	ABHD12	Q8N2K0	398 aa		4.39	□□□□□ -1.71
ATXN3-223	ENST00000553686	GBGT1	Q8N5D6	347 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms