RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 SSX4O60224 188 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 CD80P33681 288 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 TAS2R19P59542 299 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 TLE4Q04727 773 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 BPIFB2Q8N4F0 458 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 OR5T2Q8NGG2 359 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 DEDD2Q8WXF8 326 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 RAB1BQ9H0U4 201 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 TMEM106BQ9NUM4 274 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 LAMP3Q9UQV4 416 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 COL12A1Q99715 3063 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 UTP20O75691 2785 aaKnown RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 IGKV1D-17A0A075B6S4 117 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 IGHV3OR15-7A0A075B7D8 119 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 IGHV1-69-2A0A0G2JMI3 117 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 OR2AT4A6NND4 320 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 TMEM178BH3BS89 294 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 CD3DP04234 171 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 DTYMKP23919 212 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 PRDX2P32119 198 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 MRPS15P82914 257 aaKnown RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 PAN3Q58A45 887 aaKnown RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 SHEQ5VZ18 495 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 SFRP4Q6FHJ7 346 aaPredicted RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 NRARPQ7Z6K4 114 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 OR4S1Q8NGB4 309 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 ST6GALNAC5Q9BVH7 336 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
APEX1-205ENST00000553555 ZNF230Q9UIE0 474 aaPredicted RBP11.53□□□□□ -0.56
APEX1-205ENST00000553555 USF3Q68DE3 2245 aa11.52□□□□□ -0.56
APEX1-205ENST00000553555 A1L4Q6 167 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 NAP1L6A6NFF2 107 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 HSPB6O14558 160 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 MT-ND4P03905 459 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 TFF1P04155 84 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 CD74P04233 296 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 COL10A1Q03692 680 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 TEX36Q5VZQ5 186 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 OR52W1Q6IF63 320 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 STEAP1BQ6NZ63 245 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
APEX1-205ENST00000553555 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 CCL17Q92583 94 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 CACNG6Q9BXT2 260 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 ETAA1Q9NY74 926 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 ZNF222Q9UK12 451 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 DSCAML1Q8TD84 2053 aa11.52□□□□□ -0.57
APEX1-205ENST00000553555 OOEPA6NGQ2 149 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 ZNF736B4DX44 427 aaPredicted RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 PSPNO60542 156 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 ZNF205O95201 554 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 NAPSAO96009 420 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 FCGR3AP08637 254 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 COX6B1P14854 86 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 MUC1P15941 1255 aaPredicted RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 COL8A2P25067 703 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 BTCP35070 178 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 MDH2P40926 338 aaKnown RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 MICBQ29980 383 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 OR4C16Q8NGL9 310 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 ANGPTL6Q8NI99 470 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 MAFIPQ8WZ33 124 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 RIMS4Q9H426 269 aaPredicted RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 TMEM165Q9HC07 324 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 ZNF701Q9NV72 531 aaPredicted RBP11.51□□□□□ -0.57
APEX1-205ENST00000553555 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 DCHS2Q6V1P9 2916 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
APEX1-205ENST00000553555 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
APEX1-205ENST00000553555 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 TRBV6-6A0A0A6YYG2 114 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 FAM240BA0A1B0GVZ2 78 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 TMEM82A0PJX8 343 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 LGALS8O00214 317 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 RAB3DO95716 219 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 AMY2BP19961 511 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 SLC6A1P30531 599 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
APEX1-205ENST00000553555 GABRA2P47869 451 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 HFEQ30201 348 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 STUMQ69YW2 141 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 FAAP20Q6NZ36 180 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 Q6ZPA2 131 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 DUSP18Q8NEJ0 188 aa11.5□□□□□ -0.57
APEX1-205ENST00000553555 DEFB108BQ8NET1 73 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms