RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 GYPAP02724 150 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 CD55P08174 381 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 DBTP11182 482 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RPS2P15880 293 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 HNF1AP20823 631 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 CD80P33681 288 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 PMELP40967 661 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 GABRA2P47869 451 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 GPM6AP51674 278 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 GBX2P52951 348 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 OR12D2P58182 307 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ACTC1P68032 377 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ACTA1P68133 377 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF85Q03923 595 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 MAB21L1Q13394 359 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 TMED1Q13445 227 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 MED21Q13503 144 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 CHRFAM7AQ494W8 412 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 C6orf52Q5T4I8 152 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF684Q5T5D7 378 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 LIPNQ5VXI9 398 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 PLCXD3Q63HM9 321 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 DNM1P46Q6ZS02 220 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 Q75L30 129 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SATL1Q86VE3 508 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ODF3L1Q8IXM7 274 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ENTHD1Q8IYW4 607 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RDH10Q8IZV5 341 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 C8orf59Q8N0T1 100 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 BATF2Q8N1L9 274 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 STX19Q8N4C7 294 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ACBD7Q8N6N7 88 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF676Q8N7Q3 588 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SPERTQ8NA61 448 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 BPIFB6Q8NFQ5 453 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RHOXF1Q8NHV9 184 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 THAP6Q8TBB0 222 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RPL3LQ92901 407 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RAB39BQ96DA2 213 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 LGALS12Q96DT0 336 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 C4orf36Q96KX1 117 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RTL8AQ9BWD3 113 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF665Q9H7R5 613 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 PLEKHA1Q9HB21 404 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 CHMP1AQ9HD42 196 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 HAO2Q9NYQ3 351 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 RCC2Q9P258 522 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 MRM2Q9UI43 246 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SLC7A11Q9UPY5 501 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 R4GMQ9 66 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 HIVEP2P31629 2446 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SONP18583 2426 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TRBV2A0A0J9YWF9 115 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF816-ZNF321PA0A0X1KG74 233 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 PNMA8CA0A1B0GUJ8 204 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 hCG_38984A0A1B0GV85 526 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CDIPTO14735 213 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 PHF1O43189 567 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 AKR7A2O43488 359 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SPRY1O43609 319 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 RP2O75695 350 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SULT1C4O75897 302 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TTRP02766 147 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 RPSAP08865 295 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 VPREB1P12018 145 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MYOD1P15172 320 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MYL12AP19105 171 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CPT2P23786 658 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ACKR3P25106 362 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OTX1P32242 354 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CAPGP40121 348 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MDH2P40926 338 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CAPZA1P52907 286 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CD81P60033 236 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 LMO4P61968 165 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 BTG1P62324 171 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 GNB2P62879 340 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CSNK2BP67870 215 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MRPS11P82912 194 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SCN1BQ07699 218 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ZMYND11Q15326 602 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 FAM120AOSQ5T036 256 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF691Q5VV52 312 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 FAM122CQ6P4D5 195 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TMPRSS11AQ6ZMR5 421 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 LRRC28Q86X40 367 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CATSPERDQ86XM0 798 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ANGPTL5Q86XS5 388 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ELMOD2Q8IZ81 293 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MUC20Q8N307 709 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SPICQ8N5J4 248 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 PACRGLQ8N7B6 248 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OR1M1Q8NGA1 313 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OR8B3Q8NGG8 313 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms