RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 POU3F1Q03052 451 aaPredicted RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 TLE3Q04726 772 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 IL13RA2Q14627 380 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 NKAIN1Q4KMZ8 207 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 GGNBP1Q5YKI7 109 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 ABHD12BQ7Z5M8 362 aaPredicted RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 FAM219AQ8IW50 185 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 ISOC2Q96AB3 205 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 IP6K3Q96PC2 410 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 BANF2Q9H503 90 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 CHODLQ9H9P2 273 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 IL17BQ9UHF5 180 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 TMED3Q9Y3Q3 217 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 CACNA1CQ13936 2221 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 MED12Q93074 2177 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 A0A1W2PNV4 684 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 ANKUB1A6NFN9 424 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 VSTM2BA6NLU5 285 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 NME2P1O60361 137 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 OR2C1O95371 312 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 F10P00742 488 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 GZMHP20718 246 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 APOBEC3AP31941 199 aaPredicted RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 PTGDSP41222 190 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 LSM6P62312 80 aaKnown RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 GRB2P62993 217 aaKnown RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 SPEM2Q0P670 501 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 KIAA0141Q14154 515 aaPredicted RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 HEPN1Q6WQI6 88 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 SUMF2Q8NBJ7 301 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 NTNG2Q96CW9 530 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 RNF2Q99496 336 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 ZNF2Q9BSG1 426 aaPredicted RBP6.41□□□□□ -1.38
BEST3-212ENST00000553096 SCRT1Q9BWW7 348 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 TM2D1Q9BX74 207 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 PECRQ9BY49 303 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 DECR2Q9NUI1 292 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 ALKBH4Q9NXW9 302 aa6.41□□□□□ -1.38
BEST3-212ENST00000553096 A0A087WWC5 75 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 FOXI3A8MTJ6 420 aaPredicted RBP6.4□□□□□ -1.38
BEST3-212ENST00000553096 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 TSTD3H0UI37 97 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SDCBPO00560 298 aaPredicted RBP6.4□□□□□ -1.38
BEST3-212ENST00000553096 BLVRBP30043 206 aaPredicted RBP6.4□□□□□ -1.38
BEST3-212ENST00000553096 MC5RP33032 325 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 ID4P47928 161 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 OR2B8PP59922 312 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SOHLH1Q5JUK2 328 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SLC16A14Q7RTX9 510 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.4□□□□□ -1.38
BEST3-212ENST00000553096 WDR5BQ86VZ2 330 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SEMA6DQ8NFY4 1073 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 OR10S1Q8NGN2 331 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SSC4DQ8WTU2 575 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 SMIM3Q9BZL3 60 aa6.4□□□□□ -1.38
BEST3-212ENST00000553096 PTPRZ1P23471 2315 aaPredicted RBP6.4□□□□□ -1.39
BEST3-212ENST00000553096 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 TRBV11-1A0A0K0K1C0 115 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 TGOLN2O43493 480 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 HPNP05981 417 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 PAX1P15863 534 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 LMO1P25800 156 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 LRTM2Q8N967 370 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 OR8B12Q8NGG6 310 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 RAB24Q969Q5 203 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 GALNT14Q96FL9 552 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 DIRC2Q96SL1 478 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 DUSP23Q9BVJ7 150 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 ZNF430Q9H8G1 570 aaPredicted RBP6.4□□□□□ -1.39
BEST3-212ENST00000553096 GPR84Q9NQS5 396 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 PARPBPQ9NWS1 579 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 GAR1Q9NY12 217 aaKnown RBP6.4□□□□□ -1.39
BEST3-212ENST00000553096 PADI1Q9ULC6 663 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 HDGFL3Q9Y3E1 203 aa6.4□□□□□ -1.39
BEST3-212ENST00000553096 ELOA3CA0A087WX78 387 aaPredicted RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 IGKV1D-43A0A0B4J1Z2 117 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 A4D1N5 150 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 SEC14L6B5MCN3 397 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 EFNA2O43921 213 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 DKK1O94907 266 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 IGHG1P01857 330 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 BIDP55957 195 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 CLRN1P58418 232 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 RPS23P62266 143 aaKnown RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 GAMTQ14353 236 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 ZNF239Q16600 458 aaKnown RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 ARSJQ5FYB0 599 aaPredicted RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 RTN4RL2Q86UN3 420 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 NOXO1Q8NFA2 376 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 STXBP6Q8NFX7 210 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 OR13D1Q8NGV5 346 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 HAS2Q92819 552 aa6.39□□□□□ -1.39
BEST3-212ENST00000553096 MRPL24Q96A35 216 aaKnown RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 ZNF48Q96MX3 618 aaPredicted RBP6.39□□□□□ -1.39
BEST3-212ENST00000553096 SPACA5Q96QH8 159 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms