RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 TNFAIP8O95379 198 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 GTF2F2P13984 249 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 KLRD1Q13241 179 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 C1orf100Q5SVJ3 147 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 GPR157Q5UAW9 335 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 CD200R1LQ6Q8B3 271 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 METAP1DQ6UB28 335 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-226ENST00000553011 BPIFB2Q8N4F0 458 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 TMEM104Q8NE00 496 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 TSPAN14Q8NG11 270 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 COQ2Q96H96 371 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 MS4A7Q9GZW8 240 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-226ENST00000553011 BANF2Q9H503 90 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 ING3Q9NXR8 418 aa11.58□□□□□ -0.56
PTCH1-226ENST00000553011 AK6Q9Y3D8 172 aaKnown RBP11.58□□□□□ -0.56
PTCH1-226ENST00000553011 SHISA3A0PJX4 238 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 OR7C1O76099 320 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 CD37P11049 281 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 FPR2P25090 351 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 DLX6P56179 175 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 P2RX3P56373 397 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 MEF2CQ06413 473 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 AESQ08117 197 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 BLMHQ13867 455 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 GPR176Q14439 515 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 ATXN7L3Q14CW9 347 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 TAF9Q16594 264 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 PAN3Q58A45 887 aaKnown RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 SYT6Q5T7P8 510 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 C11orf42Q8N5U0 333 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 FAM46BQ96A09 425 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 METTL8Q9H825 291 aaKnown RBP11.57□□□□□ -0.56
PTCH1-226ENST00000553011 PCDHB16Q9NRJ7 776 aa11.57□□□□□ -0.56
PTCH1-226ENST00000553011 A0A087WXM4 84 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 A0A1W2PRD5 423 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 A0A1W2PRF3 423 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 A0A1W2PRM7 423 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 hADV38S2A0JD32 116 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 TCF21O43680 179 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 CRTAPO75718 401 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 CSN2P05814 226 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 MGMTP16455 207 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 PRTN3P24158 256 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 ERP29P30040 261 aaKnown RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 GLIPR1P48060 266 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 TUSC1Q2TAM9 212 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 KRTAP21-3Q3LHN1 58 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 C22orf42Q6IC83 251 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 OR10K2Q6IF99 312 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 C9orf139Q6ZV77 190 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 SIGLECL1Q8N7X8 197 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 SUMF2Q8NBJ7 301 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 ZNF48Q96MX3 618 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 ZNF696Q9H7X3 374 aa11.56□□□□□ -0.56
PTCH1-226ENST00000553011 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 FBN1P35555 2871 aaKnown RBP11.56□□□□□ -0.56
PTCH1-226ENST00000553011 MDFIC2A0A1B0GVS7 189 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 C17orf98A8MV24 154 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 SLC22A1O15245 554 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 VENTXO95231 258 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 UBBP0CG47 229 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 ZNF728P0DKX0 622 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 GALP22466 123 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 HTR2CP28335 458 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 P2RY14Q15391 338 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 MPV17LQ2QL34 196 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 KRBOX4Q5JUW0 171 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 ATAD3CQ5T2N8 411 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 HCP5Q6MZN7 132 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 ZNF782Q6ZMW2 699 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-226ENST00000553011 LINC00596Q86U02 117 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 PNKDQ8N490 385 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 OR6M1Q8NGM8 313 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 PLPPR1Q8TBJ4 325 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 SLC25A28Q96A46 364 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 MRPS24Q96EL2 167 aaKnown RBP11.55□□□□□ -0.56
PTCH1-226ENST00000553011 CYYR1Q96J86 154 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 DPCDQ9BVM2 203 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-226ENST00000553011 SUCNR1Q9BXA5 334 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 SELENOIQ9C0D9 397 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 OR51E2Q9H255 320 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 IFT22Q9H7X7 185 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 PLGRKTQ9HBL7 147 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 TXNL4BQ9NX01 149 aaKnown RBP11.55□□□□□ -0.56
PTCH1-226ENST00000553011 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
PTCH1-226ENST00000553011 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms