RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 PRPSAP1Q14558 356 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 PDK2Q15119 407 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 EBPQ15125 230 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 BCL2A1Q16548 175 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 ZC2HC1BQ5TFG8 222 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF544Q6NX49 715 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 SCIMPQ6UWF3 145 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CYHR1Q6ZMK1 362 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 GPRIN3Q6ZVF9 776 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 HSD17B13Q7Z5P4 300 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 PLCZ1Q86YW0 608 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF786Q8N393 782 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CCDC54Q8NEL0 328 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 OR51F2Q8NH61 342 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 LINC01006Q8NI28 216 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CD300LFQ8TDQ1 290 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 HGDQ93099 445 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CIDECQ96AQ7 238 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 MUCL1Q96DR8 90 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 FOPNLQ96NB1 174 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 VGLL1Q99990 258 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 B9D2Q9BPU9 175 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TBL1YQ9BQ87 522 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TMEM246Q9BRR3 403 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 RACGAP1Q9H0H5 632 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 Q9H3A6 140 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TPK1Q9H3S4 243 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 RETNQ9HD89 108 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TUBG2Q9NRH3 451 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 MCUBQ9NWR8 336 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CD274Q9NZQ7 290 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 RWDD2AQ9UIY3 292 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 RPUSD1Q9UJJ7 312 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
LIMA1-208ENST00000551691 TRAV6A0A075B6T7 132 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 IGHV1OR15-1A0A075B7D0 117 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 A0A0B4J2A0 478 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 GOLGA8QA0A0J9YX86 632 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 RAB19A4D1S5 217 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 GOLGA8KD6RF30 607 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 F6UB75 175 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 GOLGA8RI6L899 631 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 UGT2B11O75310 529 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 EIF3GO75821 320 aaKnown RBP eCLIP2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OR4A8P0C604 315 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 AGTR1P30556 359 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ANP32AP39687 249 aaKnown RBP2.83□□□□□ -1.96
LIMA1-208ENST00000551691 KIR2DS4P43632 304 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 TBPL1P62380 186 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 CXCL6P80162 114 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 LCN2P80188 198 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 HMGCS1Q01581 520 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ACVR1Q04771 509 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 SLAMF1Q13291 335 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 CLINT1Q14677 625 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 TRAM2Q15035 370 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 TMED2Q15363 201 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 PAN3Q58A45 887 aaKnown RBP2.83□□□□□ -1.96
LIMA1-208ENST00000551691 AVPI1Q5T686 147 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 C6orf183Q5T699 404 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 GPR157Q5UAW9 335 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ANKRD22Q5VYY1 191 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ADNP2Q6IQ32 1131 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 TMEM179BQ7Z7N9 219 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 GALNT10Q86SR1 603 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 LHFPL3Q86UP9 236 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OR10H4Q8NGA5 316 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OR51S1Q8NGJ8 323 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OR10D3Q8NH80 312 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ABHD3Q8WU67 409 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 YIPF5Q969M3 257 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 SLC25A38Q96DW6 304 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 BIRC8Q96P09 236 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OPALINQ96PE5 141 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ALS2CR12Q96Q35 445 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 OR4K3Q96R72 315 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 KCNA7Q96RP8 456 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 POTEKPQ9BYX7 375 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 MRPL37Q9BZE1 423 aaKnown RBP2.83□□□□□ -1.96
LIMA1-208ENST00000551691 DSN1Q9H410 356 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 MMP26Q9NRE1 261 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 CLEC5AQ9NY25 188 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ADA2Q9NZK5 511 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 MED11Q9P086 117 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 ZNF581Q9P0T4 197 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 SHPKQ9UHJ6 478 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 LGALS13Q9UHV8 139 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 DKKL1Q9UK85 242 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 UGT2A1Q9Y4X1 527 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
LIMA1-208ENST00000551691 VPS13DQ5THJ4 4388 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 DOCK11Q5JSL3 2073 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 A0A0G2JMP0 313 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 A0A0J9YW62 118 aa2.82□□□□□ -1.96
LIMA1-208ENST00000551691 A0A0X1KG70 313 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms