RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 LINC00470Q9BZP3 86 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 ZNF286AQ9HBT8 521 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 AMDHD2Q9Y303 409 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 GVINP1Q7Z2Y8 2422 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 IGHV3-64DA0A0J9YX35 117 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 A0A1W2PR80 420 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 RPL36A-HNRNPH2H7BZ11 118 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 LINC01387J3KSC0 135 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 AGPAT2O15120 278 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 BET1O15155 118 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 IFNA21P01568 189 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 NME2P22392 152 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 SRSF6Q13247 344 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 MSI2Q96DH6 328 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 PRRX2Q99811 253 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 MEMO1Q9Y316 297 aa12.16□□□□□ -0.46
CALCOCO1-218ENST00000550804 PHF1O43189 567 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 PET100P0DJ07 73 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 GNRHRP30968 328 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 WNT5AP41221 380 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 ECI1P42126 302 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 LPAR6P43657 344 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 TMEM211Q6ICI0 200 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 MEX3BQ6ZN04 569 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 LURAP1LQ8IV03 231 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 C17orf78Q8N4C9 275 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 TLNRD1Q9H1K6 362 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 LPAR3Q9UBY5 353 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 FBXL17Q9UF56 701 aa12.15□□□□□ -0.46
CALCOCO1-218ENST00000550804 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 TM4SF5O14894 197 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 NKX2-8O15522 239 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 PPYP01298 95 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 ASCL1P50553 236 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 CEACAM21Q3KPI0 293 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 MOB3AQ96BX8 217 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 HS3ST1O14792 307 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 ATG12O94817 140 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 IL18BPO95998 194 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 SLC10A1Q14973 349 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 HAGHLQ6PII5 290 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 PUSL1Q8N0Z8 303 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 APOBEC3DQ96AK3 386 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
CALCOCO1-218ENST00000550804 RAB19A4D1S5 217 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 PMP22Q01453 160 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 HERPUD1Q15011 391 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 OR2T2Q6IF00 324 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 NKX6-2Q9C056 277 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 IGKV1-6A0A0C4DH72 117 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 PCP4L1A6NKN8 68 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 NME2P1O60361 137 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 SOX8P57073 446 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 NHLH2Q02577 135 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 Q8NFD4 153 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 SECTM1Q8WVN6 248 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 TREM1Q9NP99 234 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 SPRR3Q9UBC9 169 aa12.13□□□□□ -0.47
CALCOCO1-218ENST00000550804 PTPRBP23467 1997 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 MED19A0JLT2 244 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 MED6O75586 246 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 RHBDL1O75783 438 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 CEACAM1P13688 526 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 CA6P23280 308 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 FGF12P61328 243 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 NEK7Q8TDX7 302 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 RDH5Q92781 318 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 ARL11Q969Q4 196 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 RSRP1Q9BUV0 290 aa12.12□□□□□ -0.47
CALCOCO1-218ENST00000550804 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms