RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 DRAXINQ8NBI3 349 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-205ENST00000550592 OR2L8Q8NGY9 312 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 OR8U1Q8NH10 309 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 CCL4L1Q8NHW4 92 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 GPX8Q8TED1 209 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 RGP1Q92546 391 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-205ENST00000550592 PTX4Q96A99 478 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 RPEQ96AT9 228 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 NARS2Q96I59 477 aaKnown RBP2.9□□□□□ -1.95
LIMA1-205ENST00000550592 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 CHMP5Q9NZZ3 219 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 HYOU1Q9Y4L1 999 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 TSSC4Q9Y5U2 329 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-205ENST00000550592 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
LIMA1-205ENST00000550592 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 IGKV1-8A0A0C4DH67 115 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 LOC100653049A0A140TA62 436 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 TMEM223A0PJW6 202 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 TMEM120BA0PK00 339 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 H7C1H1 209 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 BPY2O14599 106 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 SOCS1O15524 211 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 ERI3O43414 337 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 KRT34O76011 436 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 MRPL3P09001 348 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 TACSTD2P09758 323 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 RHOXF2BP0C7M4 288 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 CCT6AP40227 531 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 RBM34P42696 430 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 PSMD7P51665 324 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 CDKN2DP55273 166 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 RPS24P62847 133 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 DGCR6Q14129 220 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 KLHL40Q2TBA0 621 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 GCSAMLQ5JQS6 135 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 TTC19Q6DKK2 380 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 BHLHA15Q7RTS1 189 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 DOLPP1Q86YN1 238 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 CALHM1Q8IU99 346 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 H1FOOQ8IZA3 346 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 DAW1Q8N136 415 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 KRT222Q8N1A0 295 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 FRZBQ92765 325 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 RBMXL1Q96E39 390 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 ANKRD36BP1Q96IX9 119 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 BTN2A3PQ96KV6 586 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF382Q96SR6 550 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 CYTL1Q9NRR1 136 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 NYNRINQ9P2P1 1898 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 PEF1Q9UBV8 284 aaKnown RBP2.89□□□□□ -1.95
LIMA1-205ENST00000550592 OPN4Q9UHM6 478 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 CHD5Q8TDI0 1954 aa2.89□□□□□ -1.95
LIMA1-205ENST00000550592 ANKRD12Q6UB98 2062 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 LRCOL1A6NCL2 159 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 SYCE1LA8MT33 242 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 PDZK1P1A8MUH7 402 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 REM1O75628 298 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 VAMP5O95183 116 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 TNNC2P02585 160 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 APCSP02743 223 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 PGA5P0DJD9 388 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 SPTBP11277 2137 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 SERPINB8P50452 374 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 FABP6P51161 128 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 RAB11AP62491 216 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 TNNC1P63316 161 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF266Q14584 549 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 RAB11BQ15907 218 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 RPEL1Q2QD12 228 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 SMUG1Q53HV7 270 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 CCDC122Q5T0U0 273 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 ZNF684Q5T5D7 378 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 WDR82Q6UXN9 313 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 FAM122BQ7Z309 247 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 VKORC1L1Q8N0U8 176 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 LRRC75AQ8NAA5 344 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 OR6N1Q8NGY5 312 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 OR51F2Q8NH61 342 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.88□□□□□ -1.95
LIMA1-205ENST00000550592 ISG20Q96AZ6 181 aaKnown RBP2.88□□□□□ -1.95
LIMA1-205ENST00000550592 FLYWCH2Q96CP2 140 aaKnown RBP2.88□□□□□ -1.95
LIMA1-205ENST00000550592 HSD17B10Q99714 261 aaKnown RBP2.88□□□□□ -1.95
LIMA1-205ENST00000550592 FAM107BQ9H098 131 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 OR52D1Q9H346 318 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 UBAP1Q9NZ09 502 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 SLC17A7Q9P2U7 560 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 YARS2Q9Y2Z4 477 aaKnown RBP2.88□□□□□ -1.95
LIMA1-205ENST00000550592 RFNGQ9Y644 331 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 MYH11P35749 1972 aa2.88□□□□□ -1.95
LIMA1-205ENST00000550592 IGHV3OR16-9A0A0B4J2B5 98 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 C9J4A7 227 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 RBFOX2O43251 390 aaKnown RBP eCLIP2.87□□□□□ -1.95
LIMA1-205ENST00000550592 TCF21O43680 179 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 NEMFO60524 1076 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 ADRA2AP08913 450 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 OR56A5P0C7T3 313 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 PGA4P0DJD7 388 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 PGA3P0DJD8 388 aa2.87□□□□□ -1.95
LIMA1-205ENST00000550592 NELFEP18615 380 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms