RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SLC25A46Q96AG3 418 aa10.78□□□□□ -0.68
RAB5C-206ENST00000550406 TMEM186Q96B77 213 aa10.78□□□□□ -0.68
RAB5C-206ENST00000550406 DCTN5Q9BTE1 182 aa10.78□□□□□ -0.68
RAB5C-206ENST00000550406 CST11Q9H112 138 aa10.78□□□□□ -0.68
RAB5C-206ENST00000550406 DCSTAMPQ9H295 470 aa10.78□□□□□ -0.68
RAB5C-206ENST00000550406 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
RAB5C-206ENST00000550406 F8P00451 2351 aa10.77□□□□□ -0.68
RAB5C-206ENST00000550406 CSPG4Q6UVK1 2322 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 PPIAL4CA0A0B4J2A2 164 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A10PA6NDY2 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A18PA6NE21 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A16PA6NEW6 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A20PA6NIJ5 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A7PA6NKC0 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A22PA8MWA6 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A12PA8MX19 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A5PA8MXJ8 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A23PA8MXZ1 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 H3BMQ9 156 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 OR7C1O76099 320 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A15PP0C7V4 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A13PP0C7W8 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A14PP0C7W9 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 FAM90A24PP0C7X0 464 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 GABRR1P24046 479 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 TMEM50BP56557 158 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 GRK1Q15835 563 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 USP43Q70EL4 1123 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 OR8H2Q8N162 312 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 BPIFB2Q8N4F0 458 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 SUMF2Q8NBJ7 301 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 CHST4Q8NCG5 386 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 OR4M1Q8NGD0 313 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 C8orf46Q8TAG6 207 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 PLPPR1Q8TBJ4 325 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 LGALS14Q8TCE9 139 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 RAB40AQ8WXH6 277 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 ISOC1Q96CN7 298 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 COQ2Q96H96 371 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 BCL7BQ9BQE9 202 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 NUDT16L1Q9BRJ7 211 aaKnown RBP10.77□□□□□ -0.69
RAB5C-206ENST00000550406 TMEM59Q9BXS4 323 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 PPA2Q9H2U2 334 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 C19orf12Q9NSK7 152 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
RAB5C-206ENST00000550406 RAB22AQ9UL26 194 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 INSIG2Q9Y5U4 225 aa10.77□□□□□ -0.69
RAB5C-206ENST00000550406 TRAV20A0A0B4J274 112 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 KIR2DS1A0A191URI9 304 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 DPPA5A6NC42 116 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 GPR37O15354 613 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 SOCS1O15524 211 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 ECDO95905 644 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-206ENST00000550406 AVPP01185 164 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 CHATP28329 748 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 PAX8Q06710 450 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 C11orf91Q3C1V1 193 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 MOGAT2Q3SYC2 334 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 PAN3Q58A45 887 aaKnown RBP10.76□□□□□ -0.69
RAB5C-206ENST00000550406 ATAD3CQ5T2N8 411 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 CD276Q5ZPR3 534 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 CLEC9AQ6UXN8 241 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-206ENST00000550406 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 OR5D13Q8NGL4 314 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 H1FXQ92522 213 aaKnown RBP10.76□□□□□ -0.69
RAB5C-206ENST00000550406 POM121Q96HA1 1249 aa10.76□□□□□ -0.69
RAB5C-206ENST00000550406 DPCDQ9BVM2 203 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-206ENST00000550406 HSPB6O14558 160 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 MGST3O14880 152 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 RAB6AP20340 208 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 FUT3P21217 361 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 ERP29P30040 261 aaKnown RBP10.75□□□□□ -0.69
RAB5C-206ENST00000550406 GLIPR1P48060 266 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 VEGFCP49767 419 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 AESQ08117 197 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 ATXN7L3Q14CW9 347 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-206ENST00000550406 FOXB2Q5VYV0 432 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 TMEM200BQ69YZ2 307 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 RAB12Q6IQ22 244 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 Q71RC1 249 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-206ENST00000550406 GLCCI1Q86VQ1 547 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 CROCCP3Q8IVE0 287 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 DYNC2LI1Q8TCX1 351 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 PTX4Q96A99 478 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 SLC25A38Q96DW6 304 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 SULT4A1Q9BR01 284 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 TMPRSS13Q9BYE2 586 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 OPN4Q9UHM6 478 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 PEX16Q9Y5Y5 336 aa10.75□□□□□ -0.69
RAB5C-206ENST00000550406 MEX3AA1L020 520 aaKnown RBP10.74□□□□□ -0.69
RAB5C-206ENST00000550406 RAB27BO00194 218 aa10.74□□□□□ -0.69
RAB5C-206ENST00000550406 ENSAO43768 121 aaKnown RBP10.74□□□□□ -0.69
RAB5C-206ENST00000550406 TMEM127O75204 238 aa10.74□□□□□ -0.69
RAB5C-206ENST00000550406 PDCD6O75340 191 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms