RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 HACD4Q5VWC8 232 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 PEG10Q86TG7 708 aaKnown RBP11.81□□□□□ -0.52
CACNB3-216ENST00000550391 RTN4RL2Q86UN3 420 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 Q8N402 240 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 C19orf18Q8NEA5 215 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 DEFB108BQ8NET1 73 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 ANGPTL6Q8NI99 470 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 FCAMRQ8WWV6 532 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 BORCS5Q969J3 196 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
CACNB3-216ENST00000550391 FAAP24Q9BTP7 215 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 CCDC32Q9BV29 185 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 KCNK7Q9Y2U2 307 aa11.81□□□□□ -0.52
CACNB3-216ENST00000550391 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
CACNB3-216ENST00000550391 IGKV1D-17A0A075B6S4 117 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 TRAV24A0A0B4J272 114 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 GABARAPH6UMI1 98 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 SIRPB1O00241 398 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 SLC33A1O00400 549 aaPredicted RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 FSTL3O95633 263 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 PTHLHP12272 177 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 GABRA2P47869 451 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 GNG2P59768 71 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 RBM39Q14498 530 aaKnown RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 KCNJ8Q15842 424 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 PAN3Q58A45 887 aaKnown RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 OLFML2AQ68BL7 652 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 STUMQ69YW2 141 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 BRICD5Q6PL45 260 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 OR8H2Q8N162 312 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 SUMF2Q8NBJ7 301 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 NRGNQ92686 78 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 SULT4A1Q9BR01 284 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 CHODLQ9H9P2 273 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 ZNF701Q9NV72 531 aaPredicted RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 ZNF222Q9UK12 451 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 EDARQ9UNE0 448 aa11.8□□□□□ -0.52
CACNB3-216ENST00000550391 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
CACNB3-216ENST00000550391 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 IGHV4-39P01824 125 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 GYPAP02724 150 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 LPLP06858 475 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 PAX1P15863 534 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 TMEM33P57088 247 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 BTG1P62324 171 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 DGCR2P98153 550 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 COL10A1Q03692 680 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 ARFRP1Q13795 201 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 ATPAF1Q5TC12 328 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-216ENST00000550391 OR52I2Q8NH67 350 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 NEK7Q8TDX7 302 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 SMIM4Q8WVI0 70 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 FOXC2Q99958 501 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-216ENST00000550391 DNTTIP1Q9H147 329 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 ZNF665Q9H7R5 613 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 BARX1Q9HBU1 254 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-216ENST00000550391 MYOZ1Q9NP98 299 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-216ENST00000550391 AK3Q9UIJ7 227 aa11.79□□□□□ -0.52
CACNB3-216ENST00000550391 ELF5Q9UKW6 265 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-216ENST00000550391 USF3Q68DE3 2245 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 MEIOCA2RUB1 952 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 HSPB6O14558 160 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 TNFRSF13BO14836 293 aaPredicted RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 NDUFA2O43678 99 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 TFF1P04155 84 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 CD3GP09693 182 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 AMY2BP19961 511 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 MRPS15P82914 257 aaKnown RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 ZMYND11Q15326 602 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 BAK1Q16611 211 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 RNASE12Q5GAN4 147 aaKnown RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 TRIQKQ629K1 86 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 BPIFB2Q8N4F0 458 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 ZNF561Q8N587 486 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 GPX8Q8TED1 209 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 NUDCD2Q8WVJ2 157 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 RAB1CQ92928 201 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 GCDHQ92947 438 aaPredicted RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 SDSLQ96GA7 329 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 SNX22Q96L94 193 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 CMSS1Q9BQ75 279 aaKnown RBP11.78□□□□□ -0.52
CACNB3-216ENST00000550391 TMEM165Q9HC07 324 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
CACNB3-216ENST00000550391 COL6A5A8TX70 2615 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms