RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FBXO24O75426 580 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZFPL1O95159 310 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 IGKV1D-12P01611 117 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 CD2P06729 351 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 RAB3AP20336 220 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 CDK2P24941 298 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 PAX6P26367 422 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 DCKP27707 260 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 CD34P28906 385 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 KCNJ3P48549 501 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 SNU13P55769 128 aaKnown RBP8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 SCN1BQ07699 218 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 KRBOX4Q5JUW0 171 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 ELP2Q6IA86 826 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 CCDC144NLQ6NUI1 221 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 CCBE1Q6UXH8 406 aaPredicted RBP8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 TMPRSS11AQ6ZMR5 421 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 NDUFA11Q86Y39 141 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF555Q8NEP9 628 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR51A4Q8NGJ6 313 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 RDH12Q96NR8 316 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 BARHL1Q9BZE3 327 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 S100A14Q9HCY8 104 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 PCDHB16Q9NRJ7 776 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 SERTAD4Q9NUC0 356 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 FAM118AQ9NWS6 357 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 IL36RNQ9UBH0 155 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 FOXJ3Q9UPW0 622 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 A0A087X0M5 115 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 A0A1B0GX30 115 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 MEX3AA1L020 520 aaKnown RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 M0QZK8 103 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 C21orf33P30042 268 aaPredicted RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 MNDAP41218 407 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 PTGFRP43088 359 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 VDAC2P45880 294 aaPredicted RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 AESQ08117 197 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 MED21Q13503 144 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 LDLRAD2Q5SZI1 272 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF691Q5VV52 312 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 Q6P435 159 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 RPL22L1Q6P5R6 122 aaKnown RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 REC114Q7Z4M0 266 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 TMEM219Q86XT9 240 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 PQLC1Q8N2U9 271 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR5D18Q8NGL1 313 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR4P4Q8NGL7 312 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR10AC1Q8NH08 325 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 GPR148Q8TDV2 347 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 TSEN15Q8WW01 171 aaKnown RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 RFT1Q96AA3 541 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 GPER1Q99527 375 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 JAM3Q9BX67 310 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 ISG20L2Q9H9L3 353 aaKnown RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 PAK1IP1Q9NWT1 392 aaPredicted RBP8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 CMYA5Q8N3K9 4069 aa8.75□□□□□ -1.01
VTI1BP3-201ENST00000550220 KBTBD11-OT1A0A1B0GTJ5 212 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 SLC33A1O00400 549 aaPredicted RBP8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 IGLV1-47P01700 117 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 FAM106CPP0CH98 169 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 CALCBP10092 127 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 GLIPR1P48060 266 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZP1P60852 638 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 PAX5Q02548 391 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 IL13RA2Q14627 380 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 RSU1Q15404 277 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF529Q6P280 563 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 SLC16A12Q6ZSM3 486 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 C11orf44Q8N8P7 122 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR10A7Q8NGE5 316 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR51T1Q8NGJ9 327 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR52I1Q8NGK6 324 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR9G1Q8NH87 305 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 SPACA5Q96QH8 159 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 SLC29A1Q99808 456 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 PDCD1LG2Q9BQ51 273 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF649Q9BS31 505 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 AMBNQ9NP70 447 aa8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 FGF20Q9NP95 211 aaPredicted RBP8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 CHCHD3Q9NX63 227 aaKnown RBP8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 SMPD3Q9NY59 655 aaPredicted RBP8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 AMMECR1Q9Y4X0 333 aaPredicted RBP8.74□□□□□ -1.01
VTI1BP3-201ENST00000550220 VWFP04275 2813 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 H0YJX3 145 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 BUB1B-PAK6H3BSN5 160 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF780AO75290 641 aaPredicted RBP8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 MMP23AO75900 390 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR2F2O95006 317 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 MYL12AP19105 171 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 BLCAPP62952 87 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 PPP3R1P63098 170 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 CDK5R1Q15078 307 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 HLA-DRB5Q30154 266 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 PAN3Q58A45 887 aaKnown RBP8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 PRAMEF5Q5TYX0 476 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 ASCL4Q6XD76 172 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms