RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CCL3L1P16619 93 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 UBA52P62987 128 aaKnown RBP21.26■□□□□ 0.99
CPSF6-205ENST00000550075 KLRD1Q13241 179 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 HSD17B12Q53GQ0 312 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 NHLRC3Q5JS37 347 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 Q6P435 159 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 CEACAM19Q7Z692 300 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 LINC00596Q86U02 117 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 TNFRSF14Q92956 283 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 MUL1Q969V5 352 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 ZNF714Q96N38 554 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 PPA2Q9H2U2 334 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 ESM1Q9NQ30 184 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 SF3B6Q9Y3B4 125 aaKnown RBP21.26■□□□□ 0.99
CPSF6-205ENST00000550075 FAM96BQ9Y3D0 163 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 SLC33A1O00400 549 aaPredicted RBP21.25■□□□□ 0.99
CPSF6-205ENST00000550075 NPFFO15130 113 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 SERPINA2P20848 420 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 SLC22A6Q4U2R8 563 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 AWAT2Q6E213 333 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 TRAPPC6BQ86SZ2 158 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 FAM216AQ8WUB2 273 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 SLC25A28Q96A46 364 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 UQCC2Q9BRT2 126 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 PRDM13Q9H4Q3 707 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 ACOT13Q9NPJ3 140 aa21.25■□□□□ 0.99
CPSF6-205ENST00000550075 A0A0G2JK05 382 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 MDFIC2A0A1B0GVS7 189 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 SC5DO75845 299 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 FBP1P09467 338 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 UCHL1P09936 223 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 GTF2F2P13984 249 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 RBM11P57052 281 aaKnown RBP21.24■□□□□ 0.99
CPSF6-205ENST00000550075 ACTG1P63261 375 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 INSL4Q14641 139 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 PIGYQ3MUY2 71 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 PAN3Q58A45 887 aaKnown RBP21.24■□□□□ 0.99
CPSF6-205ENST00000550075 SPATA3Q8NHX4 192 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 TMEM203Q969S6 136 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 FOXRED1Q96CU9 486 aaPredicted RBP21.24■□□□□ 0.99
CPSF6-205ENST00000550075 ST3GAL6Q9Y274 331 aa21.24■□□□□ 0.99
CPSF6-205ENST00000550075 SOX21Q9Y651 276 aaPredicted RBP21.24■□□□□ 0.99
CPSF6-205ENST00000550075 TRGV10A0A0A0MS01 117 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 C17orf98A8MV24 154 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 CLDN34H7C241 214 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 ARL6IP5O75915 188 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 GABRA5P31644 462 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 DLX1P56177 255 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 RPS25P62851 125 aaKnown RBP21.23■□□□□ 0.99
CPSF6-205ENST00000550075 FAM27D1Q5T7N8 215 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 GLT8D1Q68CQ7 371 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 TPRX1Q8N7U7 411 aa21.23■□□□□ 0.99
CPSF6-205ENST00000550075 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.23■□□□□ 0.99
CPSF6-205ENST00000550075 MRPS24Q96EL2 167 aaKnown RBP21.23■□□□□ 0.99
CPSF6-205ENST00000550075 UBE2J1Q9Y385 318 aaPredicted RBP21.23■□□□□ 0.99
CPSF6-205ENST00000550075 A0A0U1RQK1 487 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 PAHP00439 452 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 KCNJ3P48549 501 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 DLX6P56179 175 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 PRB3Q04118 309 aaPredicted RBP21.22■□□□□ 0.99
CPSF6-205ENST00000550075 MPV17LQ2QL34 196 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 KRBOX4Q5JUW0 171 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 GLIPR1L1Q6UWM5 242 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 PIP4P2Q8N4L2 257 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 FCGR1BQ92637 280 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 GAL3ST2Q9H3Q3 398 aa21.22■□□□□ 0.99
CPSF6-205ENST00000550075 A0A1W2PRD5 423 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 A0A1W2PRF3 423 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 A0A1W2PRM7 423 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 MEIOCA2RUB1 952 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 OR7C1O76099 320 aaPredicted RBP21.21■□□□□ 0.99
CPSF6-205ENST00000550075 SAA4P35542 130 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 AESQ08117 197 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 ATXN7L3Q14CW9 347 aaPredicted RBP21.21■□□□□ 0.99
CPSF6-205ENST00000550075 MIDNQ504T8 468 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 ZNF782Q6ZMW2 699 aaPredicted RBP21.21■□□□□ 0.99
CPSF6-205ENST00000550075 TMEM86BQ8N661 226 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 OR13D1Q8NGV5 346 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 SSMEM1Q8WWF3 244 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 DUX5Q96PT3 197 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 IFT22Q9H7X7 185 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 GHRLQ9UBU3 117 aa21.21■□□□□ 0.99
CPSF6-205ENST00000550075 ODAMA1E959 279 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 MEX3AA1L020 520 aaKnown RBP21.2■□□□□ 0.98
CPSF6-205ENST00000550075 HSPB6O14558 160 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 HOXA3O43365 443 aaPredicted RBP21.2■□□□□ 0.98
CPSF6-205ENST00000550075 CLPXO76031 633 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 RNASE1P07998 156 aaKnown RBP21.2■□□□□ 0.98
CPSF6-205ENST00000550075 UBBP0CG47 229 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 SRMP19623 302 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 EMX1Q04741 257 aaPredicted RBP21.2■□□□□ 0.98
CPSF6-205ENST00000550075 SLC9A3R2Q15599 337 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 Q6YL49 198 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 TCF23Q7RTU1 214 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 LDLRAD3Q86YD5 345 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 C11orf42Q8N5U0 333 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 OR4D6Q8NGJ1 314 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 OR6C3Q9NZP0 311 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 LRRC42Q9Y546 428 aa21.2■□□□□ 0.98
CPSF6-205ENST00000550075 POMT1Q9Y6A1 747 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms