RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 IFNA21P01568 189 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 GNRHRP30968 328 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 ACTBL2Q562R1 376 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 ACOT7LQ6ZUV0 252 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 SLC51BQ86UW2 128 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 RBPMSQ93062 196 aaKnown RBP10.9□□□□□ -0.67
SCAF11-209ENST00000547018 TMEM45BQ96B21 275 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 FBLN5Q9UBX5 448 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 RNF150Q9ULK6 438 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 HMSDA8MTL9 139 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 CDK2AP1O14519 115 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TSPAN4O14817 238 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TM4SF5O14894 197 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TBPP20226 339 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 PPP1CBP62140 327 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 FOXC1Q12948 553 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 NHLRC3Q5JS37 347 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 CLLU1Q5K131 121 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 GGNBP1Q5YKI7 109 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 Q6ZPA2 131 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF610Q8N9Z0 462 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 NTNG2Q96CW9 530 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TM2D1Q9BX74 207 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 RGCCQ9H4X1 137 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 SLC2A9Q9NRM0 540 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 KCNS2Q9ULS6 477 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TNFSF18Q9UNG2 199 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 MRPS18CQ9Y3D5 142 aaKnown RBP10.89□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF175Q9Y473 711 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 FOSL1P15407 271 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 PRDM14Q9GZV8 571 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TRAV17A0A0B4J275 112 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 RRASP10301 218 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF83P51522 516 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 TCF15Q12870 199 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 SNTB1Q13884 538 aaKnown RBP10.89□□□□□ -0.67
SCAF11-209ENST00000547018 RBM39Q14498 530 aaKnown RBP10.89□□□□□ -0.67
SCAF11-209ENST00000547018 PRAMEF6Q5VXH4 476 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
SCAF11-209ENST00000547018 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
SCAF11-209ENST00000547018 HRH4Q9H3N8 390 aa10.89□□□□□ -0.67
SCAF11-209ENST00000547018 SLC34A2O95436 690 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 MPV17P39210 176 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 MPPED2Q15777 294 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 CEACAM21Q3KPI0 293 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 PAN3Q58A45 887 aaKnown RBP10.88□□□□□ -0.67
SCAF11-209ENST00000547018 TMEM268Q5VZI3 342 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 FAM214BQ7L5A3 538 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 NANOS1Q8WY41 292 aaKnown RBP10.88□□□□□ -0.67
SCAF11-209ENST00000547018 RNF126Q9BV68 326 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 SLC5A7Q9GZV3 580 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 H3BP45 60 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 DEGS1O15121 323 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 BTN1A1Q13410 526 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 STPG2Q8N412 459 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 SUN5Q8TC36 379 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 CCL28Q9NRJ3 127 aa10.88□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF724A8MTY0 619 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TIMM8AO60220 97 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 WDR1O75083 606 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 IL2RAP01589 272 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TK1P04183 234 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 BMP5P22003 454 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ID4P47928 161 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TMEM42Q69YG0 159 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 FAM58AQ8N1B3 248 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 SUMF2Q8NBJ7 301 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ADAT1Q9BUB4 502 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TRAF4Q9BUZ4 470 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 PPP1R3CQ9UQK1 317 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 YLPM1P49750 1951 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 PCP4L1A6NKN8 68 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 CDRT15L2A8MXV6 281 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 CAV2P51636 162 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 GNG3P63215 75 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 SMCO1Q147U7 214 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 RPL7L1Q6DKI1 246 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ZADH2Q8N4Q0 377 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TMEM217Q8N7C4 229 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 C10orf35Q96D05 121 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 LINC00470Q9BZP3 86 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 C1orf123Q9NWV4 160 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF107Q9UII5 783 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 RALYQ9UKM9 306 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TRAPPC2LQ9UL33 140 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ASH1LQ9NR48 2969 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 IGKV1D-13A0A0B4J2D9 117 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 A0A0D9SG52 128 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 CRYZL1O95825 349 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 PPYP01298 95 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 IGKV1-13P0DP09 117 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 MRPL49Q13405 166 aaKnown RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 EDDM3AQ14507 147 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms