RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RPL31P62899 125 aaKnown RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 PAX8Q06710 450 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 BLMHQ13867 455 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 RBM39Q14498 530 aaKnown RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 P2RY14Q15391 338 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 TAF9Q16594 264 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 PAN3Q58A45 887 aaKnown RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 ATAD3CQ5T2N8 411 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 METTL11BQ5VVY1 283 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 CROCCP3Q8IVE0 287 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 LY6G5BQ8NDX9 201 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM104Q8NE00 496 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 OR51D1Q8NGF3 324 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 C8orf46Q8TAG6 207 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 C1orf147Q96MC9 270 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 BEX2Q9BXY8 128 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 RAB22AQ9UL26 194 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 hCG_1809904A0A1W2PP81 198 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 A0A1W2PPE2 198 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 A0A1W2PR64 198 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 A0A1W2PRV1 198 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 hADV38S2A0JD32 116 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM14DPA8MWL7 114 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 PSPNO60542 156 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 FCN3O75636 299 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 IL1AP01583 271 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 CSN2P05814 226 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 ERP29P30040 261 aaKnown RBP11.38□□□□□ -0.59
PTCH1-213ENST00000546820 KCNJ3P48549 501 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 CLDN12P56749 244 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 MXD1Q05195 221 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 FAM120AOSQ5T036 256 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 FAM185AQ8N0U4 392 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 SUMF2Q8NBJ7 301 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 OR4M1Q8NGD0 313 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 Q96M66 194 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 NEDD4LQ96PU5 975 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 TMPRSS13Q9BYE2 586 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 CHST6Q9GZX3 395 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 FBLN5Q9UBX5 448 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 ARHGAP32A7KAX9 2087 aa11.38□□□□□ -0.59
PTCH1-213ENST00000546820 GLAP06280 429 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 FUT3P21217 361 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 SRP14P37108 136 aaKnown RBP11.37□□□□□ -0.59
PTCH1-213ENST00000546820 OR3A1P47881 315 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 ARF6P62330 175 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 RPS27AP62979 156 aaKnown RBP11.37□□□□□ -0.59
PTCH1-213ENST00000546820 QRFPP83859 136 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 EDDM3AQ14507 147 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM200BQ69YZ2 307 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 OR10K2Q6IF99 312 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 NANPQ8TBE9 248 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 NEK7Q8TDX7 302 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 DACT3Q96B18 629 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-213ENST00000546820 DPCDQ9BVM2 203 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-213ENST00000546820 PPA2Q9H2U2 334 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 ONECUT1Q9UBC0 465 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 DAPK2Q9UIK4 370 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 PEX16Q9Y5Y5 336 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 KPTNQ9Y664 436 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 HIVEP2P31629 2446 aa11.37□□□□□ -0.59
PTCH1-213ENST00000546820 TRAV24A0A0B4J272 114 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 SMIM30A4D0T7 59 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 INAFM1C9JVW0 142 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 TOX4O94842 621 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 CLEC2LP0C7M8 214 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 SERPINB10P48595 397 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 P2RX3P56373 397 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 VBP1P61758 197 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 AESQ08117 197 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 CHRFAM7AQ494W8 412 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 KRBOX4Q5JUW0 171 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 RAB12Q6IQ22 244 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 SFXN4Q6P4A7 337 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 KIR3DL3Q8N743 410 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 ZNF565Q8N9K5 539 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 PTX4Q96A99 478 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 WDFY2Q96P53 400 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 TM2D1Q9BX74 207 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
PTCH1-213ENST00000546820 ZNF469Q96JG9 3925 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-213ENST00000546820 WNK2Q9Y3S1 2297 aa11.35□□□□□ -0.59
PTCH1-213ENST00000546820 ABCA2Q9BZC7 2435 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms