RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TOR1AO14656 332 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 CA11O75493 328 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 KDM4BO94953 1096 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PTTG1O95997 202 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 CRYAAP02489 173 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 HCKP08631 526 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR4E1P0C645 316 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 IL7P13232 177 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 IGFBP2P18065 325 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 G0S2P27469 103 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PMELP40967 661 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 HOXA1P49639 335 aaPredicted RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 EFNB2P52799 333 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 CEBPGP53567 150 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 ATP1B3P54709 279 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 CLDN12P56749 244 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PITPNAQ00169 270 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PSG7Q13046 419 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PLA2G7Q13093 441 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PRDX4Q13162 271 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 ASAH1Q13510 395 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 GPR176Q14439 515 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 HLXQ14774 488 aaPredicted RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 DAZAP2Q15038 168 aaPredicted RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 OXA1LQ15070 435 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 BAK1Q16611 211 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PLAC9Q5JTB6 97 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 FAM131AQ6UXB0 335 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 TMEM108Q6UXF1 575 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 RNF144BQ7Z419 303 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 ANGPTL5Q86XS5 388 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 JAGN1Q8N5M9 183 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR8G5Q8NG78 346 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR4M2Q8NGB6 313 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR51T1Q8NGJ9 327 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR1J1Q8NGS3 322 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 CHPT1Q8WUD6 406 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 TMEM171Q8WVE6 324 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 ST8SIA4Q92187 359 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 YIPF5Q969M3 257 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 S100A16Q96FQ6 103 aaKnown RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 ZC3HAV1LQ96H79 300 aaKnown RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 ABHD1Q96SE0 405 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OR2J1Q9GZK6 312 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 LPAR5Q9H1C0 372 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 RIMS4Q9H426 269 aaPredicted RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 GPR173Q9NS66 373 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PTTG3PQ9NZH4 202 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PURGQ9UJV8 347 aaKnown RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 ANAPC10Q9UM13 185 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 OSGIN2Q9Y236 505 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 PLEKHA6Q9Y2H5 1048 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 MRPS28Q9Y2Q9 187 aaKnown RBP7.15□□□□□ -1.26
VPS29-203ENST00000546588 DSCAML1Q8TD84 2053 aa7.15□□□□□ -1.27
VPS29-203ENST00000546588 HIVEP3Q5T1R4 2406 aa7.15□□□□□ -1.27
VPS29-203ENST00000546588 LOC102723971A0A1B0GUV8 181 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 FAM172BPA6NC97 362 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 WIPF3A6NGB9 483 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 A6NIN4 97 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 ANKRD30BLA7E2S9 258 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 GABARAPH6UMI1 98 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 KALRNO60229 2985 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CDC14BO60729 498 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CRYGCP07315 174 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CHRM2P08172 466 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CCNOP22674 350 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CDK2P24941 298 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 GIFP27352 417 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 LOXP28300 417 aaPredicted RBP7.14□□□□□ -1.27
VPS29-203ENST00000546588 ARL3P36405 182 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CFHR2P36980 270 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CD200P41217 278 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 OR3A4PP47883 348 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 ERVK11-1P61568 191 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 RPS27AP62979 156 aaKnown RBP7.14□□□□□ -1.27
VPS29-203ENST00000546588 PDZK1IP1Q13113 114 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 ST3GAL2Q16842 350 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 PCGF3Q3KNV8 242 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 ZNF718Q3SXZ3 478 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 NCMAPQ5T1S8 102 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 AWAT2Q6E213 333 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 GLIPR1L1Q6UWM5 242 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 LINC00596Q86U02 117 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 CALHM1Q8IU99 346 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 AQP3Q92482 292 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 SEC22CQ9BRL7 303 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 TMEM204Q9BSN7 226 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 OR51I2Q9H344 312 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 SEBOXQ9HB31 216 aaPredicted RBP7.14□□□□□ -1.27
VPS29-203ENST00000546588 TBC1D24Q9ULP9 559 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 HSF4Q9ULV5 492 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 SLC7A11Q9UPY5 501 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 RNF24Q9Y225 148 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 MRPS7Q9Y2R9 242 aaKnown RBP7.14□□□□□ -1.27
VPS29-203ENST00000546588 PRELID3BQ9Y3B1 194 aa7.14□□□□□ -1.27
VPS29-203ENST00000546588 PUS1Q9Y606 427 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS29-203ENST00000546588 ADGRG4Q8IZF6 3080 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms