RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 BOD1Q96IK1 185 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 PCGF1Q9BSM1 259 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MRPS28Q9Y2Q9 187 aaKnown RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 MEMO1Q9Y316 297 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 YLPM1P49750 1951 aaKnown RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 PHF3Q92576 2039 aaKnown RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 A6NJY4 79 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 HSPB2A8KAH6 182 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 TNFSF12O43508 249 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 GPR137BO60478 399 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 IGFBP3P17936 291 aaPredicted RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 RABIFP47224 123 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MLF1P58340 268 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SLC17A1Q14916 467 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 HSPB2Q16082 182 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 TMEM176BQ3YBM2 270 aaPredicted RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 CALHM1Q8IU99 346 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SAXO1Q8IYX7 474 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 OR5D18Q8NGL1 313 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ZNF519Q8TB69 540 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MMABQ96EY8 250 aaPredicted RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 S1PR5Q9H228 398 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 RBKSQ9H477 322 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ELOVL3Q9HB03 270 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 LAMTOR2Q9Y2Q5 125 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 RHBDD3Q9Y3P4 386 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 FREM3P0C091 2139 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 IGLV1-36A0A0B4J1U3 117 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 SRSF10O75494 262 aaKnown RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 RENP00797 406 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 OPN1MWP04001 364 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 OPN1MW2P0DN77 364 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 OPN1MW3P0DN78 364 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 LYL1P12980 280 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 HSF1Q00613 529 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ZNF92Q03936 586 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 TLE1Q04724 770 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ICAM4Q14773 271 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 TMEM225Q6GV28 225 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 SGPP2Q8IWX5 399 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 PRR22Q8IZ63 422 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ASB5Q8WWX0 329 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 DNASE2BQ8WZ79 361 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ADIPOR1Q96A54 375 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 PHF7Q9BWX1 381 aaPredicted RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 B9D1Q9UPM9 204 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 TMEM14AQ9Y6G1 99 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 FER1L5A0AVI2 2057 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 A0A1W2PNV4 684 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 WIPF3A6NGB9 483 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 AHRRA9YTQ3 701 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 SFT2D2O95562 160 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 SEMA4FO95754 770 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 NBEAP1P0C6P0 100 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 CDKN1AP38936 164 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 ROM1Q03395 351 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ADIRFQ15847 76 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 OR2G3Q8NGZ4 309 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ANGPTL4Q9BY76 406 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 C5orf66Q9H5L9 145 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 ZNF703Q9H7S9 590 aaPredicted RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 TMEM9BQ9NQ34 198 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 AK3Q9UIJ7 227 aa6.87□□□□□ -1.31
UBR1-202ENST00000546274 MRPS18BQ9Y676 258 aaKnown RBP6.87□□□□□ -1.31
UBR1-202ENST00000546274 IGHV2-70DA0A0C4DH43 119 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 CDC14CA4D256 554 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 C19orf67A6NJJ6 358 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 B4DGG1 531 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 C11orf98E9PRG8 122 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 MPZL1O95297 269 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 DDAH2O95865 285 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 IFNA21P01568 189 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 IGKV3-11P04433 115 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 CHRM2P08172 466 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 GLRA1P23415 457 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 TAS2R31P59538 309 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 IL24Q13007 206 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.86□□□□□ -1.31
UBR1-202ENST00000546274 RTN4RL2Q86UN3 420 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 LYPD6Q86Y78 171 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 ZNF721Q8TF20 911 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 REEP6Q96HR9 211 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 LRRC61Q9BV99 259 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 PATZ1Q9HBE1 687 aaKnown RBP6.86□□□□□ -1.31
UBR1-202ENST00000546274 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
UBR1-202ENST00000546274 A0A1B0GU03 582 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms