RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RAB5BP61020 215 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 SRYQ05066 204 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 CXorf66Q5JRM2 361 aaPredicted RBP13.61□□□□□ -0.23
LDLR-204ENST00000545707 PMS2CLQ68D20 193 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 C15orf54Q8N8G6 183 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 OR2V1Q8NHB1 315 aa13.61□□□□□ -0.23
LDLR-204ENST00000545707 FBXO9Q9UK97 447 aaPredicted RBP13.61□□□□□ -0.23
LDLR-204ENST00000545707 FREM1Q5H8C1 2179 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 IGSF23A1L1A6 192 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 FOXG1P55316 489 aaPredicted RBP13.6□□□□□ -0.23
LDLR-204ENST00000545707 IL13RA2Q14627 380 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 OR8B8Q15620 311 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 TBC1D26Q86UD7 250 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 FAM24BQ8N5W8 94 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 EXTL1Q92935 676 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 PAPOLGQ9BWT3 736 aaKnown RBP13.6□□□□□ -0.23
LDLR-204ENST00000545707 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
LDLR-204ENST00000545707 RNF122Q9H9V4 155 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 UBE2J1Q9Y385 318 aaPredicted RBP13.6□□□□□ -0.23
LDLR-204ENST00000545707 A0A1W2PPE2 198 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 C1orf196B1AJZ1 125 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 CYC1P08574 325 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 GDF1P27539 372 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 GNMTQ14749 295 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 ZFP62Q8NB50 900 aaPredicted RBP13.6□□□□□ -0.23
LDLR-204ENST00000545707 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 ADGRG7Q96K78 797 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 PARPBPQ9NWS1 579 aa13.6□□□□□ -0.23
LDLR-204ENST00000545707 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 LINC01387J3KSC0 135 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TNFSF12O43508 249 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 SSSCA1O60232 199 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
LDLR-204ENST00000545707 IGKV1-13P0DP09 117 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 HAAOP46952 286 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 GPM6AP51674 278 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TMEM211Q6ICI0 200 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 SLC16A13Q7RTY0 426 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TMEM171Q8WVE6 324 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 HLA-CQ95604 372 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 SGCZQ96LD1 299 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 EGLN1Q9GZT9 426 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 ZNF407Q9C0G0 2248 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 PRRC2CQ9Y520 2896 aaKnown RBP13.59□□□□□ -0.23
LDLR-204ENST00000545707 ZNF724A8MTY0 619 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 CST7O76096 145 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 CEBPGP53567 150 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 UCP2P55851 309 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 UCP3P55916 312 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
LDLR-204ENST00000545707 SPINK14Q6IE38 97 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 ZNF695Q8IW36 515 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 GAPTQ8N292 157 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TMEM217Q8N7C4 229 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 KCNE4Q8WWG9 221 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TMEM222Q9H0R3 208 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 IL36GQ9NZH8 169 aa13.59□□□□□ -0.23
LDLR-204ENST00000545707 TRDCB7Z8K6 153 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
LDLR-204ENST00000545707 HSD17B6O14756 317 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 ADAM20O43506 726 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 PDGFBP01127 241 aaPredicted RBP13.58□□□□□ -0.24
LDLR-204ENST00000545707 HLA-HP01893 362 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 FOLR2P14207 255 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 NKX2-1P43699 371 aaPredicted RBP13.58□□□□□ -0.24
LDLR-204ENST00000545707 EIF2S3LQ2VIR3 472 aaKnown RBP13.58□□□□□ -0.24
LDLR-204ENST00000545707 ABLIM2Q6H8Q1 611 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 OR2G3Q8NGZ4 309 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 NANPQ8TBE9 248 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 KCNJ16Q9NPI9 418 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
LDLR-204ENST00000545707 DNPH1O43598 174 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 ATP6V0CP27449 155 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 OR2B8PP59922 312 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 IGFBP7Q16270 282 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 PRRG4Q9BZD6 226 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 SMOC1Q9H4F8 434 aa13.58□□□□□ -0.24
LDLR-204ENST00000545707 ZNF503-AS2A6NEH8 195 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 RPL36A-HNRNPH2H7BZ11 118 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 K7N7A8 449 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 TMEM50AO95807 157 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 S100A6P06703 90 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 PCBD1P61457 104 aa13.57□□□□□ -0.24
LDLR-204ENST00000545707 ARF1P84077 181 aaKnown RBP13.57□□□□□ -0.24
LDLR-204ENST00000545707 HMGN3Q15651 99 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms