RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TNFSF18Q9UNG2 199 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 BCL3P20749 454 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 PLPPR5Q32ZL2 321 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 SEZ6L2Q6UXD5 910 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 SIRT7Q9NRC8 400 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 DTX4Q9Y2E6 619 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 MMP24Q9Y5R2 645 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 LANCL1O43813 399 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 TMIGD3P0DMS9 266 aaPredicted RBP11□□□□□ -0.65
COL4A6-209ENST00000545689 GNG4P50150 75 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 FUT5Q11128 374 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 RPEL1Q2QD12 228 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 LINC00052Q96N35 136 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
COL4A6-209ENST00000545689 PARP14Q460N5 1801 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 B4E171 279 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 GEMIN2O14893 280 aaKnown RBP11□□□□□ -0.65
COL4A6-209ENST00000545689 TSPAN7P41732 249 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 TEX30Q5JUR7 227 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 DHRS13Q6UX07 377 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 TSPAN2O60636 221 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 HAND1O96004 215 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 LRRC3BQ96PB8 259 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 ISG15P05161 165 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 SULT1A1P50225 295 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 GABRA6Q16445 453 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 ZNF66Q6ZN08 573 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 LRFN3Q9BTN0 628 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 ASCL1P50553 236 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 OR5I1Q13606 314 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 OR10AD1Q8NGE0 317 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 OR10AC1Q8NH08 325 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
COL4A6-209ENST00000545689 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
COL4A6-209ENST00000545689 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
COL4A6-209ENST00000545689 MFNGO00587 321 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 ANKRD34CP0C6C1 535 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 MMP9P14780 707 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 GZMHP20718 246 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 NANOS3P60323 173 aaKnown RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 POLR2GP62487 172 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 IFITM3Q01628 133 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 INO80CQ6PI98 192 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 BCL2L2Q92843 193 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 ZNF501Q96CX3 271 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 SIRT4Q9Y6E7 314 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 ARID2Q68CP9 1835 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HLA-DQB1P01920 261 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 PAX6P26367 422 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 PMELP40967 661 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HFEQ30201 348 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 NFAM1Q8NET5 270 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 SEBOXQ9HB31 216 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 OR2W1Q9Y3N9 320 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 CENPVL1A0A0U1RR11 272 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 TTRP02766 147 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 CCL3P10147 92 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 OPRK1P41145 380 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 CEBPEQ15744 281 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 FAM27BQ5VT28 67 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 MRGPRDQ8TDS7 321 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 MOB3AQ96BX8 217 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 FAM122AQ96E09 287 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 KLK13Q9UKR3 277 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 A0A1W2PNV4 684 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 TUSC5Q8IXB3 177 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 CHAC2Q8WUX2 184 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 RPEQ96AT9 228 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 FBXO17Q96EF6 278 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 NOL4LQ96MY1 436 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 NUDT16L1Q9BRJ7 211 aaKnown RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 KLHDC2Q9Y2U9 406 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 TRAV38-1A0A0B4J264 116 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HES3Q5TGS1 186 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 CLEC9AQ6UXN8 241 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 GAPTQ8N292 157 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HSD17B10Q99714 261 aaKnown RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 VSIG4Q9Y279 399 aa10.99□□□□□ -0.65
COL4A6-209ENST00000545689 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
COL4A6-209ENST00000545689 HSBP1O75506 76 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 LYZL6O75951 148 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 SP1P08047 785 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 CEACAM3P40198 252 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 GNB2P62879 340 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 TRIP6Q15654 476 aaKnown RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-209ENST00000545689 SMIM10L1P0DMW3 83 aa10.98□□□□□ -0.65
COL4A6-209ENST00000545689 GNG10P50151 68 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms