RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ALMS1Q8TCU4 4167 aa2.01□□□□□ -2.09
SNHG1-224ENST00000545688 ARHGAP32A7KAX9 2087 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CLPSL1A2RUU4 121 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 GOLGA6L10A6NI86 522 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ATP6V1G2-DDX39BF2Z307 99 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 LOC110117498-PIK3R3F6TDL0 507 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 INS-IGF2F8WCM5 200 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 GOLGA6L19H0YKK7 550 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 C3orf84H3BNL1 204 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 K7EIL1 84 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 PLPP1O14494 284 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 SPOPO43791 374 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 BGLAPP02818 100 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 GYPCP04921 128 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ALDOBP05062 364 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 LINC00869P0C866 280 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 PABPC4LP0CB38 370 aaKnown RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 CPMP14384 443 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 COL8A2P25067 703 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 EVI2BP34910 448 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 MAGEA3P43357 314 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 RFX3P48380 749 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 RGS4P49798 205 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 HNMTP50135 292 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF83P51522 516 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CDKN2DP55273 166 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CTBP2P56545 445 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 TMEM33P57088 247 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 PSPHP78330 225 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 TGM3Q08188 693 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 PLCXD2Q0VAA5 305 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 PDK3Q15120 406 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 C18orf21Q32NC0 220 aaPredicted RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 COA6Q5JTJ3 125 aaKnown RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 CDKL4Q5MAI5 379 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CPTPQ5TA50 214 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 NCR3LG1Q68D85 454 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CES3Q6UWW8 571 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF546Q86UE3 836 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 SNX32Q86XE0 403 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ZCCHC24Q8N2G6 241 aaKnown RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 RIBC1Q8N443 379 aaPredicted RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 DEFB108BQ8NET1 73 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 STXBP6Q8NFX7 210 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 OR51F2Q8NH61 342 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF675Q8TD23 568 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 OSTF1Q92882 214 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 YIPF5Q969M3 257 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 TMBIM1Q969X1 311 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 GPA33Q99795 319 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 RAB1BQ9H0U4 201 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF442Q9H7R0 627 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 FN3KRPQ9HA64 309 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 SLC17A5Q9NRA2 495 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 FBXO6Q9NRD1 293 aaPredicted RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 CA10Q9NS85 328 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CHMP5Q9NZZ3 219 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 MED11Q9P086 117 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 DKKL1Q9UK85 242 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 FBXO5Q9UKT4 447 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 COPS3Q9UNS2 423 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 CFL2Q9Y281 166 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 HEATR1Q9H583 2144 aaKnown RBP2□□□□□ -2.09
SNHG1-224ENST00000545688 HSPG2P98160 4391 aa2□□□□□ -2.09
SNHG1-224ENST00000545688 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 A0A087WZY1 265 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 A0A0G2JMP0 313 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 A0A0X1KG70 313 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF716A6NP11 495 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 LYNX1G3V0Z9 82 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 AP3B1O00203 1094 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 PFDN6O15212 129 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 RBFOX2O43251 390 aaKnown RBP eCLIP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 REM1O75628 298 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 PSMG1O95456 288 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CLDN9O95484 217 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 GUCA1CO95843 209 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 IGHV2-5P01817 119 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 IGHG4P01861 327 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR4A8P0C604 315 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 IGHV3-43DP0DP04 118 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 LYNX1P0DP58 116 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 MAP3K8P41279 467 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 SLC1A2P43004 574 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 EVX1P49640 407 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 XKP51811 444 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CARD18P57730 90 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 SNRPD2P62316 118 aaKnown RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CDK16Q00536 496 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 SYCNQ0VAF6 134 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 BAMBIQ13145 260 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 NNATQ16517 81 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 PLPPR5Q32ZL2 321 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 GGTA1PQ4G0N0 100 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 TRMT12Q53H54 448 aaKnown RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF684Q5T5D7 378 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 HBMQ6B0K9 141 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR52E8Q6IFG1 317 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms