RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	C8orf46	Q8TAG6	207 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	NUDCD2	Q8WVJ2	157 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	NDUFAF3	Q9BU61	184 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	HCAR1	Q9BXC0	346 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	POLR2J2	Q9GZM3	115 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	POLR2J3	Q9H1A7	115 aa	Known RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	GORASP2	Q9H8Y8	452 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	POLE4	Q9NR33	117 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	KAAG1	Q9UBP8	84 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	ATPIF1	Q9UII2	106 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	FOXJ3	Q9UPW0	622 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	ANGPT4	Q9Y264	503 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	MAB21L2	Q9Y586	359 aa		4.86	□□□□□ -1.63
CPSF7-222	ENST00000544585	CMYA5	Q8N3K9	4069 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	hCG_38984	A0A1B0GV85	526 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR6C6	A6NF89	314 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	C3orf84	H3BNL1	204 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585		K7EIL1	84 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	GMDS	O60547	372 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	DUS4L	O95620	317 aa	Known RBP	4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	CLU	P10909	449 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	RPA2	P15927	270 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	BGN	P21810	368 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	AQP1	P29972	269 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	ERF	P50548	548 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	UBE2E1	P51965	193 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	SPIB	Q01892	262 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	AQP6	Q13520	282 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR8B8	Q15620	311 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	AANAT	Q16613	207 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	NSUN5P1	Q3KNT7	163 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	KLHL22	Q53GT1	634 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	CLEC12A	Q5QGZ9	265 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	AWAT2	Q6E213	333 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	ASRGL1	Q7L266	308 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	VMO1	Q7Z5L0	202 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	TRPT1	Q86TN4	253 aa	Known RBP	4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	RBM45	Q8IUH3	476 aa	Known RBP	4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	PDZD9	Q8IXQ8	264 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	C10orf111	Q8N326	155 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	LY6G5B	Q8NDX9	201 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	TMEM239	Q8WW34	195 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	B9D2	Q9BPU9	175 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	ECSIT	Q9BQ95	431 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	PRSS27	Q9BQR3	290 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	MMP28	Q9H239	520 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	TMPRSS5	Q9H3S3	457 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	SLC25A37	Q9NYZ2	338 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	PTTG3P	Q9NZH4	202 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	CTSZ	Q9UBR2	303 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	MED31	Q9Y3C7	131 aa		4.85	□□□□□ -1.63
CPSF7-222	ENST00000544585	IGHV3-64D	A0A0J9YX35	117 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	LOC100653049	A0A140TA62	436 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	MEIOC	A2RUB1	952 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585		E9PQ18	207 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	XKRY	O14609	159 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	NPFF	O15130	113 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR10H3	O60404	316 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	KRT34	O76011	436 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR5F1	O95221	314 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	HLA-DPB1	P04440	258 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	ALPL	P05186	524 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	IGLL1	P15814	213 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZNF26	P17031	533 aa	Predicted RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	IFNA8	P32881	189 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	PTGFR	P43088	359 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	MRPL19	P49406	292 aa	Known RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	FHIT	P49789	147 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	TAS2R41	P59536	307 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	MPPED2	Q15777	294 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	MICB	Q29980	383 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	KIAA1644	Q3SXP7	199 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	SPSB3	Q6PJ21	355 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585		Q6ZVQ6	151 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	PGAP1	Q75T13	922 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	SLC36A1	Q7Z2H8	476 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	NKAIN4	Q8IVV8	208 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	C19orf18	Q8NEA5	215 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	GPR32P1	Q8NGA4	272 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	OR9I1	Q8NGQ6	314 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	SLC7A13	Q8TCU3	470 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZNRF4	Q8WWF5	429 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	TMEM109	Q9BVC6	243 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	PAPOLG	Q9BWT3	736 aa	Known RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	CDCA4	Q9BXL8	241 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	UFSP2	Q9NUQ7	469 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	VAPA	Q9P0L0	249 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	ZMAT5	Q9UDW3	170 aa	Known RBP	4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	RIMS3	Q9UJD0	308 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585	SIGLEC9	Q9Y336	463 aa		4.84	□□□□□ -1.63
CPSF7-222	ENST00000544585		H3BUX3	64 aa		4.83	□□□□□ -1.64
CPSF7-222	ENST00000544585	RGS16	O15492	202 aa	Predicted RBP	4.83	□□□□□ -1.64
CPSF7-222	ENST00000544585	NDUFB3	O43676	98 aa		4.83	□□□□□ -1.64
CPSF7-222	ENST00000544585	SNN	O75324	88 aa	Predicted RBP	4.83	□□□□□ -1.64
CPSF7-222	ENST00000544585	KHDRBS3	O75525	346 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms