RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CXorf58Q96LI9 332 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 SIRT4Q9Y6E7 314 aaPredicted RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 MYOFQ9NZM1 2061 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 FGF2P09038 288 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 GAMTQ14353 236 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 CCL28Q9NRJ3 127 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 AMDHD2Q9Y303 409 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 STARD10Q9Y365 291 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 PTP4A3O75365 173 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 RTP5Q14D33 572 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 FNDC7Q5VTL7 733 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 RAB1CQ92928 201 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
CHD4-211ENST00000544484 TMEM33P57088 247 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 GAPTQ8N292 157 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 PRRX1P54821 245 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 MDP1Q86V88 176 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 ZNF488Q96MN9 340 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 TNXAQ16473 311 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 MMP24Q9Y5R2 645 aa11.23□□□□□ -0.61
CHD4-211ENST00000544484 C4orf51C9J302 202 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 OR2J3O76001 311 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 GOSR1O95249 250 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 PMELP40967 661 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 IRF3Q14653 427 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 FBXW9Q5XUX1 488 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
CHD4-211ENST00000544484 ALPK2Q86TB3 2170 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 CTSDP07339 412 aaPredicted RBP11.22□□□□□ -0.61
CHD4-211ENST00000544484 FBP1P09467 338 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 CPN1P15169 458 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 ORM2P19652 201 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 SLC25A30Q5SVS4 291 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 OR2J1Q9GZK6 312 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 LANCL1O43813 399 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 HPXP02790 462 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 CLEC5AQ9NY25 188 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 OR5H1A6NKK0 313 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
CHD4-211ENST00000544484 PAX5Q02548 391 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 FUT5Q11128 374 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 TGIF1Q15583 401 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 UBTD1Q9HAC8 227 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 NKX2-8O15522 239 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 ZFP36L2P47974 494 aaKnown RBP11.22□□□□□ -0.61
CHD4-211ENST00000544484 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
CHD4-211ENST00000544484 CACNA1EQ15878 2313 aa11.22□□□□□ -0.61
CHD4-211ENST00000544484 CDX4O14627 284 aaPredicted RBP11.21□□□□□ -0.61
CHD4-211ENST00000544484 STPG1Q5TH74 334 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
CHD4-211ENST00000544484 ABHD14AQ9BUJ0 271 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 RTTNQ86VV8 2226 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 PPYP01298 95 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 MMP16P51512 607 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 IL13RA2Q14627 380 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 R3HDM4Q96D70 268 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 DYNLT3P51808 116 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
CHD4-211ENST00000544484 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
CHD4-211ENST00000544484 TO15178 435 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 APELAP0DMC3 54 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 ERGP11308 486 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 TMEM37Q8WXS4 190 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 MMP26Q9NRE1 261 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 PLA2G10O15496 165 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.62
CHD4-211ENST00000544484 CHST1O43916 411 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 SSX7Q7RTT5 188 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 OR10G9Q8NGN4 311 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 OR10G7Q8NGN6 311 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 ZNF586Q9NXT0 402 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 POMT1Q9Y6A1 747 aa11.21□□□□□ -0.62
CHD4-211ENST00000544484 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
CHD4-211ENST00000544484 J3QT63 122 aa11.2□□□□□ -0.62
CHD4-211ENST00000544484 TTRP02766 147 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms