RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
MSH2-206ENST00000543555 TNRC6AQ8NDV7 1962 aaKnown RBP11.93□□□□□ -0.5
MSH2-206ENST00000543555 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
MSH2-206ENST00000543555 HOXD4P09016 255 aaPredicted RBP11.92□□□□□ -0.5
MSH2-206ENST00000543555 AADACP22760 399 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 HERV-K104P61576 105 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 MPV17LQ2QL34 196 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 TFAP2EQ6VUC0 442 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 Q6ZS49 121 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 NANOS1Q8WY41 292 aaKnown RBP11.92□□□□□ -0.5
MSH2-206ENST00000543555 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 TRAPPC2LH3BP13 241 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
MSH2-206ENST00000543555 TNFSF10P50591 281 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 MDP1Q86V88 176 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 LRTM2Q8N967 370 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
MSH2-206ENST00000543555 OR5P3Q8WZ94 311 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 IL36RNQ9UBH0 155 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 ZNF175Q9Y473 711 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 CDRT15L2A8MXV6 281 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 SYNGR1O43759 233 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 HKR1P10072 659 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 PMP22Q01453 160 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
MSH2-206ENST00000543555 IGSF11Q5DX21 431 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 OR5L1Q8NGL2 311 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 OR1S2Q8NGQ3 325 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 TMED6Q8WW62 240 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 SYT3Q9BQG1 590 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 RSRP1Q9BUV0 290 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 PCDHB10Q9UN67 800 aa11.92□□□□□ -0.5
MSH2-206ENST00000543555 DNAJC13O75165 2243 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 LILRA1O75019 489 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 DEDDO75618 318 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 NAPSAO96009 420 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 PPYP01298 95 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 HAGHLQ6PII5 290 aaPredicted RBP11.91□□□□□ -0.5
MSH2-206ENST00000543555 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 OR5T2Q8NGG2 359 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 OR11L1Q8NGX0 322 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 OR51B6Q9H340 312 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 PIGMQ9H3S5 423 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 Q9N2K0 584 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 ASF1BQ9NVP2 202 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 RNF141Q8WVD5 230 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 SPEF1Q9Y4P9 236 aa11.91□□□□□ -0.5
MSH2-206ENST00000543555 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 TAAR5O14804 337 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 MARC2Q969Z3 335 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
MSH2-206ENST00000543555 GMPPAQ96IJ6 420 aaPredicted RBP11.9□□□□□ -0.5
MSH2-206ENST00000543555 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 OR2S2Q9NQN1 319 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 CCDC36Q8IYA8 594 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
MSH2-206ENST00000543555 LSM5Q9Y4Y9 91 aaKnown RBP11.9□□□□□ -0.5
MSH2-206ENST00000543555 H7C1Q1 480 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 K7EPK0 472 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 GLI4P10075 376 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 PRKACAP17612 351 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 DUSP1P28562 367 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 GNG3P63215 75 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 P4HA3Q7Z4N8 544 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 ZNF573Q86YE8 665 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 RP1L1Q8IWN7 2480 aaPredicted RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 LGI3Q8N145 548 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 RELNP78509 3460 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 HSPB6O14558 160 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 LINC00596Q86U02 117 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 BOLLQ8N9W6 283 aaKnown RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 SPERTQ8NA61 448 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 PHF1O43189 567 aaPredicted RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 FAM157CP0CG43 387 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 CCL11P51671 97 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
MSH2-206ENST00000543555 C5orf24Q7Z6I8 188 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 BPIFCQ8NFQ6 507 aa11.89□□□□□ -0.51
MSH2-206ENST00000543555 ZNF488Q96MN9 340 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms