RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 A0A1W2PP11 408 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 TMEM82A0PJX8 343 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 SLC33A1O00400 549 aaPredicted RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 CA11O75493 328 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 NDUFB7P17568 137 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 FUT3P21217 361 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 ZFP36P26651 326 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 SNU13P55769 128 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 SCN1BQ07699 218 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 UNC119Q13432 240 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 ARL6IP1Q15041 203 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 GRK1Q15835 563 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 TAF9Q16594 264 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 PAN3Q58A45 887 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 IDNKQ5T6J7 187 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 C17orf107Q6ZR85 190 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 BTN2A1Q7KYR7 527 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 OR4M2Q8NGB6 313 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 OR56B1Q8NGI3 324 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 FAM46BQ96A09 425 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 NEDD4LQ96PU5 975 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 BARHL1Q9BZE3 327 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 NAA50Q9GZZ1 169 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 SHARPINQ9H0F6 387 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 BANF2Q9H503 90 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
DDX55-210ENST00000543016 CEPT1Q9Y6K0 416 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
DDX55-210ENST00000543016 CR1P17927 2039 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 MAP1AP78559 2803 aaPredicted RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 TRAV24A0A0B4J272 114 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 IGHV2-70DA0A0C4DH43 119 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 TMEM272A0A1B0GTI8 110 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 POM121CA8CG34 1229 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 MCRIP1C9JLW8 97 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 SIRPB1O00241 398 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 PHF1O43189 567 aaPredicted RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 PSPNO60542 156 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 PDCD6O75340 191 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 CLEC2LP0C7M8 214 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 PPIAL4GP0DN37 164 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 SLC2A2P11168 524 aaPredicted RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 SOX6P35712 828 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 OR3A1P47881 315 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 CEBPDP49716 269 aaPredicted RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 CLDN12P56749 244 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 SEC61A1P61619 476 aaKnown RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 LCN2P80188 198 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 PAX2Q02962 417 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 RAB12Q6IQ22 244 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 SUMF2Q8NBJ7 301 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 LY6G5BQ8NDX9 201 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 ISOC1Q96CN7 298 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 CMTM3Q96MX0 182 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 NUDT16L1Q9BRJ7 211 aaKnown RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 DPCDQ9BVM2 203 aaPredicted RBP10.09□□□□□ -0.79
DDX55-210ENST00000543016 LPAR5Q9H1C0 372 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 HIF1ANQ9NWT6 349 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 KCNS2Q9ULS6 477 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 HSF4Q9ULV5 492 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 SPATA2Q9UM82 520 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 INSIG2Q9Y5U4 225 aa10.09□□□□□ -0.79
DDX55-210ENST00000543016 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 A0A0A6YYH2 397 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 A0A1B0GW55 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 hCG_1809904A0A1W2PP81 198 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 A0A1W2PPE2 198 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 A0A1W2PR64 198 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 A0A1W2PRV1 198 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 hADV38S2A0JD32 116 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 A6NJ64 397 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L2P0CJ85 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L3P0CJ86 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L4P0CJ87 422 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L5P0CJ88 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L6P0CJ89 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L7P0CJ90 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 SELLP14151 372 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 ZNF182P17025 639 aaPredicted RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 P2RX3P56373 397 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 RPL31P62899 125 aaKnown RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 ATAD3CQ5T2N8 411 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DCAF12L2Q5VW00 463 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 OR10K2Q6IF99 312 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 MZT2AQ6P582 158 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4L9Q6RFH8 374 aaPredicted RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 CMTM4Q8IZR5 234 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 KIR3DL3Q8N743 410 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 OR4S1Q8NGB4 309 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 H1FXQ92522 213 aaKnown RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 DACT3Q96B18 629 aaPredicted RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 DUX4Q9UBX2 424 aa10.08□□□□□ -0.8
DDX55-210ENST00000543016 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
DDX55-210ENST00000543016 PEX16Q9Y5Y5 336 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms