RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 BCAT2O15382 392 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 CST7O76096 145 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 CCL3P10147 92 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 ZNF32P17041 273 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 GNRHRP30968 328 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 CDX1P47902 265 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 RGS19P49795 217 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 DYNLT3P51808 116 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 FUT6P51993 359 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 DSCR4P56555 118 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 DLK1P80370 383 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 OR8B8Q15620 311 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 OR2B11Q5JQS5 317 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 CXorf66Q5JRM2 361 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 PLCXD3Q63HM9 321 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 Q8WTZ3 238 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 DOK5Q9P104 306 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 PROB1E7EW31 1015 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 ADAM20O43506 726 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 ZIC3O60481 467 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 CXCL1P09341 107 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 FUT3P21217 361 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 ZNF100Q8IYN0 542 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
DDX11-223ENST00000542838 FAM185AQ8N0U4 392 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 GPR137CQ8N3F9 429 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 TMEM217Q8N7C4 229 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 CRLF2Q9HC73 371 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 GLRX2Q9NS18 164 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 SLC7A10Q9NS82 523 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 IL36GQ9NZH8 169 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
DDX11-223ENST00000542838 CCDC163A0A0D9SF12 145 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 WRBO00258 174 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 CST2P09228 141 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 LIFP15018 202 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 S100A2P29034 98 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 ICAM4Q14773 271 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 ELOBQ15370 118 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 A0A087WWC5 75 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 IFITM10A6NMD0 228 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 NXPH3O95157 252 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 SRFP11831 508 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 B4GALT1P15291 398 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 RUNX1Q01196 453 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 ZNF92Q03936 586 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 PCOLCEQ15113 449 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 PYY3Q5JQD4 70 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 GUSBP11Q6P575 273 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 C5orf24Q7Z6I8 188 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 ZNF610Q8N9Z0 462 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 TVP23CQ96ET8 276 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 TMEM56Q96MV1 263 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 WSB1Q9Y6I7 421 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
DDX11-223ENST00000542838 ZNF732B4DXR9 585 aa11.15□□□□□ -0.63
DDX11-223ENST00000542838 EXT1Q16394 746 aa11.15□□□□□ -0.63
DDX11-223ENST00000542838 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.63
DDX11-223ENST00000542838 FAM86C1Q9NVL1 165 aa11.15□□□□□ -0.63
DDX11-223ENST00000542838 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 EPHA1P21709 976 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 CCL7P80098 99 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 C9orf152Q5JTZ5 239 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 CALHM1Q8IU99 346 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 CPNE4Q96A23 557 aaPredicted RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 ALKBH3Q96Q83 286 aaPredicted RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 NIPSNAP3BQ9BS92 247 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 TMEM38BQ9NVV0 291 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 IGHV5-10-1A0A0J9YXX1 117 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 A0A1W2PQM1 296 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 OR6C6A6NF89 314 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
DDX11-223ENST00000542838 NPBWR2P48146 333 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 ERVFRD-1P60508 538 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 PSG4Q00888 419 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 ZNF506Q5JVG8 444 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 P4HA3Q7Z4N8 544 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 WDR5BQ86VZ2 330 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 ODF3L1Q8IXM7 274 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 IL22RA1Q8N6P7 574 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 ZNF611Q8N823 705 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 PFDN5Q99471 154 aa11.14□□□□□ -0.63
DDX11-223ENST00000542838 PTRH2Q9Y3E5 179 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms