RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TCTEX1D2Q8WW35 142 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 MUCL1Q96DR8 90 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 CHRNA10Q9GZZ6 450 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 PRO1933Q9H354 126 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 CEP192Q8TEP8 1941 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 A0A0U1RQV5 110 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 RRP8O43159 456 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 CYB5BO43169 146 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 SOD3P08294 240 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGFBP4P22692 258 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 GNRHRP30968 328 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 UBE2KP61086 200 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 HERV-K104P61576 105 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TMEM267Q0VDI3 215 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 KCNMB1Q16558 191 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 SLC25A53Q5H9E4 307 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 PLCXD3Q63HM9 321 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF818PQ6ZRF7 136 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TBC1D26Q86UD7 250 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 PFDN5Q99471 154 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TOLLIPQ9H0E2 274 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 VSIRQ9H7M9 311 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 UBE2J1Q9Y385 318 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 C3orf85A0A1B0GTC6 90 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 ETV2O00321 342 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 NRASP01111 189 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 PPYP01298 95 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 PAX6P26367 422 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 RBP2P50120 134 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 CCL7P80098 99 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 H3F3AP84243 136 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 LGI3Q8N145 548 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 GAPTQ8N292 157 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR4D5Q8NGN0 318 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF488Q96MN9 340 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TMPRSS5Q9H3S3 457 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 POMT1Q9Y6A1 747 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 SMG1Q96Q15 3661 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPR179Q6PRD1 2367 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZIC3O60481 467 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 MMP9P14780 707 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 LMO1P25800 156 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 OTX1P32242 354 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 NKX2-1P43699 371 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF133P52736 654 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 UCP2P55851 309 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 GNMTQ14749 295 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ELOBQ15370 118 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 OSR2Q8N2R0 312 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR5L2Q8NGL0 311 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR51B6Q9H340 312 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 DECR2Q9NUI1 292 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 USF3Q68DE3 2245 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 KNTC1P50748 2209 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 LAMA5O15230 3695 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZFP92A6NM28 416 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 MPPED1O15442 326 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 LSM6P62312 80 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ICAM4Q14773 271 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 MPV17LQ2QL34 196 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 HLA-BQ31612 363 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF429Q86V71 674 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 TMEM252Q8N6L7 170 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 CCDC54Q8NEL0 328 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 SPTSSAQ969W0 71 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 GALNT14Q96FL9 552 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 RSG1Q9BU20 258 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 TGIF2Q9GZN2 237 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 CALHM2Q9HA72 323 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 PROK2Q9HC23 129 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 PISDQ9UG56 409 aa8.93□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 SRP19P09132 144 aaKnown RBP8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 S100PP25815 95 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 RPS18P62269 152 aaKnown RBP8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 RHEBQ15382 184 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HMGN3Q15651 99 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 FADS6Q8N9I5 356 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR51H1Q8NH63 302 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 RNF138Q8WVD3 245 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 MOB3AQ96BX8 217 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 PBDC1Q9BVG4 233 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 SMOC1Q9H4F8 434 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 CCL28Q9NRJ3 127 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 GNG13Q9P2W3 67 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 MED12LQ86YW9 2145 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGLV3-12A0A075B6K2 115 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms