RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PRELID3BQ9Y3B1 194 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 LOXL2Q9Y4K0 774 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 GJE1A6NN92 205 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 SYNGR1O43759 233 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 LHFPL2Q6ZUX7 228 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 ZFP62Q8NB50 900 aaPredicted RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 OR51H1Q8NH63 302 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 SH2D2AQ9NP31 389 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 RIF1Q5UIP0 2472 aaKnown RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 IGKV1D-13A0A0B4J2D9 117 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 PPYP01298 95 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 CST2P09228 141 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 IGKV1-13P0DP09 117 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 SULT1A2P50226 295 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 RBM11P57052 281 aaKnown RBP11.76□□□□□ -0.53
BNIP3-202ENST00000540159 RUNX1Q01196 453 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 ZFP36L1Q07352 338 aaKnown RBP11.76□□□□□ -0.53
BNIP3-202ENST00000540159 DCAF12Q5T6F0 453 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 BCL2L14Q9BZR8 327 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 DNAJB11Q9UBS4 358 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 ARGFXA6NJG6 315 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
BNIP3-202ENST00000540159 PDCD6O75340 191 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
BNIP3-202ENST00000540159 GNRHRP30968 328 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 STK11Q15831 433 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 EIF5AL1Q6IS14 154 aaKnown RBP11.76□□□□□ -0.53
BNIP3-202ENST00000540159 SGCZQ96LD1 299 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 RARRES2Q99969 163 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 USF3Q68DE3 2245 aa11.76□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF732B4DXR9 585 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 JTBO76095 146 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 LYL1P12980 280 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 PRDX4Q13162 271 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 LIAT1Q6ZQX7 453 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FOXL2NBQ6ZUU3 175 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 RAB11FIP2Q7L804 512 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 GAPTQ8N292 157 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 CPT1CQ8TCG5 803 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 A0A1W2PR64 198 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ADAM20O43506 726 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FBP1P09467 338 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FUT3P21217 361 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 RAB13P51153 203 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FUT6P51993 359 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FLI1Q01543 452 aaPredicted RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 RSRP1Q9BUV0 290 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 CCL28Q9NRJ3 127 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 FOXJ2Q9P0K8 574 aa11.75□□□□□ -0.53
BNIP3-202ENST00000540159 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 PUS1Q9Y606 427 aaKnown RBP eCLIP11.75□□□□□ -0.53
BNIP3-202ENST00000540159 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 A6NLC8 198 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF44P15621 663 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
BNIP3-202ENST00000540159 OR2B8PP59922 312 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 SNRPEP62304 92 aaKnown RBP11.74□□□□□ -0.53
BNIP3-202ENST00000540159 HIKESHIQ53FT3 197 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 AWAT1Q58HT5 328 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 C20orf204Q6ZNR8 217 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 C12orf57Q99622 126 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 CARHSP1Q9Y2V2 147 aaKnown RBP11.74□□□□□ -0.53
BNIP3-202ENST00000540159 E5RGE8 158 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 CCL20P78556 96 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 ARL6IP1Q15041 203 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 GUK1Q16774 197 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF565Q8N9K5 539 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 HPSE2Q8WWQ2 592 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 MTCH1Q9NZJ7 389 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 TUBD1Q9UJT1 453 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
BNIP3-202ENST00000540159 PCSK5Q92824 1860 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 DHRS7BQ6IAN0 325 aaPredicted RBP11.73□□□□□ -0.53
BNIP3-202ENST00000540159 LGI3Q8N145 548 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 PSMF1Q92530 271 aa11.73□□□□□ -0.53
BNIP3-202ENST00000540159 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms