RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 KIAA0141Q14154 515 aaPredicted RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 EBPQ15125 230 aaKnown RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 CNN3Q15417 329 aaKnown RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 SLC9A3R2Q15599 337 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 TMEM176BQ3YBM2 270 aaPredicted RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 ACSF3Q4G176 576 aaPredicted RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 MIDNQ504T8 468 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 PLAC9Q5JTB6 97 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 CBLN3Q6UW01 205 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 GLIPR1L1Q6UWM5 242 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 SLC16A14Q7RTX9 510 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 SLC35E3Q7Z769 313 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 FAM24BQ8N5W8 94 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 ST6GALNAC3Q8NDV1 305 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 ADPRHL1Q8NDY3 354 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 BEND2Q8NDZ0 799 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 OR5R1Q8NH85 324 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 STT3BQ8TCJ2 826 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 ASB10Q8WXI3 467 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 TMEM234Q8WY98 164 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 RAB24Q969Q5 203 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 ADIPOR1Q96A54 375 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 SNRNP40Q96DI7 357 aaKnown RBP6.65□□□□□ -1.34
CCDC60-204ENST00000539847 FER1L6-AS2Q96M78 137 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 TMEM59Q9BXS4 323 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
CCDC60-204ENST00000539847 SETD2Q9BYW2 2564 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 A0A0A6YYD4 124 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 TRAV1-1A0A0B4J248 108 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PIGBOS1A0A0B4J2F0 54 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 C9J4A7 227 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 K7N7A8 449 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 HRKO00198 91 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ETV2O00321 342 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 P2RY10O00398 339 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SLC31A2O15432 143 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 TSPAN2O60636 221 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PTBP3O95758 552 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 HBE1P02100 147 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 IGKV3-11P04433 115 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 CBR1P16152 277 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF20P17024 532 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 GLRA1P23415 457 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 DTYMKP23919 212 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 RPS27P42677 84 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 GLIPR1P48060 266 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SNU13P55769 128 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SUMO3P55854 103 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 MTCP1P56278 107 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 TAS2R60P59551 318 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 RPS23P62266 143 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 RPS18P62269 152 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SRPXP78539 464 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 CHAF1BQ13112 559 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PMS2P11Q13670 270 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 HNF4GQ14541 408 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SSPNQ14714 243 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PRR30Q53SZ7 412 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PYY3Q5JQD4 70 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 THEM4Q5T1C6 240 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ARMC6Q6NXE6 501 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 Q6ZS92 163 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 TMPPEQ6ZT21 453 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 H1FNTQ75WM6 255 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 DOK3Q7L591 496 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF101Q8IZC7 436 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 OR5AS1Q8N127 324 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SUMF2Q8NBJ7 301 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 SLC38A9Q8NBW4 561 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 OR51F2Q8NH61 342 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 RNASEH2CQ8TDP1 164 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 GPR119Q8TDV5 335 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 HPSE2Q8WWQ2 592 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ST8SIA1Q92185 356 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 CMBLQ96DG6 245 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ADAT3Q96EY9 351 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 NOL4LQ96MY1 436 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 ANGPTL4Q9BY76 406 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 TBL1XR1Q9BZK7 514 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 OR11A1Q9GZK7 315 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 EIF5A2Q9GZV4 153 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 AKIRIN1Q9H9L7 192 aaPredicted RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 GSKIPQ9P0R6 139 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 DOK5Q9P104 306 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 KIAA1456Q9P272 454 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 HSF4Q9ULV5 492 aa6.64□□□□□ -1.35
CCDC60-204ENST00000539847 PTRH2Q9Y3E5 179 aaKnown RBP6.64□□□□□ -1.35
CCDC60-204ENST00000539847 LOC100509620A0A075B734 347 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 RBFOX3A6NFN3 312 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 FAM90A27PA6NNH2 459 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 TSTD3H0UI37 97 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MS4A18H0YCH9 400 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MASP2O00187 686 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 DVL1O14640 695 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 SOCS1O15524 211 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 HSPA12AO43301 675 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms